Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2205 |
Symbol | |
ID | 4022690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2465985 |
End bp | 2467961 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637962400 |
Product | carbamoyl-phosphate synthase L chain, ATP-binding |
Protein accession | YP_569341 |
Protein GI | 91976682 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0738027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.716563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGAAAC CGACTCCCTT CACCAAGGTC CTGATCGCCA ATCGCGGCGA GATCGCGCTG CGCGTCATGC GCACCGCGCG CCGGATGGGC TATGGCGTGG TCGCGGTGTA TTCCGACGCC GACGTCGATG CCGCGCATGT TCGCGAGGCC GATGAAGCCG TGGCGATCGG CGGCGCGCAG CCGTCGCAAT CCTATCTCAA CATTCCGGCT TTGATCGAAG CCGCGAAGAT CGCCGGCGCT GACGCGGTGC ACCCGGGCTA CGGCTTCCTC GCCGAGAACG AGGATTTCGC GGCGGCCTGC CGTGACGCCG GGCTGGTGTT CATCGGCCCG TCGGCGGAAT CGATCGCGTC GATGGGCAAC AAGGCCGGCG CCAAGGAGAT CATGATCAAG GCCGGCGTGC CGTGCGTGCC GGGCTATCAG GGCGCCGATC AGAGCGACGC GGCGATGATC GCGGAGGCTG GCAAGATCGG CTTTCCGGTG ATGATCAAGG CGGTCGCCGG CGGCGGCGGC CGGGGAATGC GGTTGGTCAA GGACGCAGCC GCGCTGCCGG ATGCGCTGCG TAGCGCGCGA TCCGAGGCGC AAAGCGCGTT CGGAGATCCG ACCGTGATCC TCGAACGCGC CATCGTCGAT CCGCGCCACA TCGAGATCCA GGTGTTCGGC GATCGCTATG GTCATGCGAT CCATCTCGGC GAGCGCGACT GCTCAGTGCA ACGTCGTCAT CAGAAGCTGA TCGAGGAGGC GCCGTCGCCG GCTGTGTCCG AAGCGCTGCG CGAGCAGATG GGCGTGGTCG CGGTCAACGC CGTGAAGGCG ATCGGATATG AGGGCGCCGG CACGCTGGAG TTTCTGCTCG ACGCGCAGGG CCAGTTCTAT TTTATGGAAA TGAATACGCG GCTGCAGGTC GAGCATCCGG TGACCGAGGC GATCACCGGG CTCGATCTGG TCGAGTTGCA ATTGCGGATT GCGGCCGGCG AGCCGCTGCC GCTGCGGCAG GACGAGGTCA AGTTCAACGG CCATGCCATC GAAGTGCGGC TGTGTTCGGA AGATGCCGAC AGGGACTTCA TGCCGCAATC CGGGCGGATG GCGCTGTGGC GGATGCCGGG CGAACTGCGC GTCGAGCACG CGTTGCAATC CGGCTCGGAG ATTCCGCCGT ACTACGACTC GATGATCGCC AAAATCATTG CGACCGGAGC CAGCCGCGAC GAAGCGCGGC GCAAGCTGAT CCACGGCCTC GACACCACCT TCGCATTCGG CGTGACCACC AATCGCGGCT TCCTCGCCGC CTGCCTGCGG CACGAGGCCT TCGCGAACGG CGAGGCGACC ACGGCATTCA TCGCGCAGAA TCGCGACGAC CTGACGCGCG CATTGCCCGA GGATGCCGTG CCGGCGGCCG CGGTGGCGGC GCTGCTGCTC TACGTCACCG ACCGGCACGC GCCCCCGCAT CGGCCGGGGC GCTCGCTCGC CGCGGTGTTT CCGACGCAGC TGCGGATCGA CATCGACGGC AAGCCGCAGA CCTGCGAGGT CGTCCGCGAA CGCGACGGCA GCTATCGCGT CACCCAGGAC GGCCATCCGA TCGCGTTCGA AATCGAAGAG CTCGGCCATG ACAGGATCCG CTTTCAGGCC AATTGCCTGA GCGAATCTGC GGTGTATCAC CGCGACGGCG ACCGGCTGTT CGTGCAGCGG CTCGGCGTCG GCAACACGAT CGTCGATCTC ACCCGCGCGG CTCCGCAGCG TGCGGCGGCG GCCGGCGGCG ACGGCAAGCT GCGCGCCGCG CTGAACGGCC GCGTCGTGGC GGTGCTGGTC AAGCCCGGCG AACGCGTCGC GGCCGGACAG CCGGTCCTGA CGCTGGAGGC GATGAAGATG GAGCACGTGC ATCTGGCGCC GGCGTCGGGC ATCATCGCCA TCGATGTCGC CGAGGGCGAG CAGGTCACCA CCGGCCGCAT CGTCGCCGAG ATCGAGGCTG AAACCCACCC CGCGTAA
|
Protein sequence | MLKPTPFTKV LIANRGEIAL RVMRTARRMG YGVVAVYSDA DVDAAHVREA DEAVAIGGAQ PSQSYLNIPA LIEAAKIAGA DAVHPGYGFL AENEDFAAAC RDAGLVFIGP SAESIASMGN KAGAKEIMIK AGVPCVPGYQ GADQSDAAMI AEAGKIGFPV MIKAVAGGGG RGMRLVKDAA ALPDALRSAR SEAQSAFGDP TVILERAIVD PRHIEIQVFG DRYGHAIHLG ERDCSVQRRH QKLIEEAPSP AVSEALREQM GVVAVNAVKA IGYEGAGTLE FLLDAQGQFY FMEMNTRLQV EHPVTEAITG LDLVELQLRI AAGEPLPLRQ DEVKFNGHAI EVRLCSEDAD RDFMPQSGRM ALWRMPGELR VEHALQSGSE IPPYYDSMIA KIIATGASRD EARRKLIHGL DTTFAFGVTT NRGFLAACLR HEAFANGEAT TAFIAQNRDD LTRALPEDAV PAAAVAALLL YVTDRHAPPH RPGRSLAAVF PTQLRIDIDG KPQTCEVVRE RDGSYRVTQD GHPIAFEIEE LGHDRIRFQA NCLSESAVYH RDGDRLFVQR LGVGNTIVDL TRAAPQRAAA AGGDGKLRAA LNGRVVAVLV KPGERVAAGQ PVLTLEAMKM EHVHLAPASG IIAIDVAEGE QVTTGRIVAE IEAETHPA
|
| |