Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2203 |
Symbol | |
ID | 4022688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2462581 |
End bp | 2464185 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637962398 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_569339 |
Protein GI | 91976680 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.334168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.340753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGTC TTGAAGCAAC CGGCGGCGTG CCGGGACCGG GCCGGATCGG CCGGGTCGCG ATCGGCGATA TCCTGCGGAA ATCGGCGCTG CGGTTTCGCG ACCGCATCGC GCTCACCGAT GGCGCGCGGC AGGTGAGTTA TGACGAGCTT GAACGCGACG CCAATCGCTT CGCGAACTAC CTCGTCTCGC GCGGCCTGAA GCCGGGAGAC AAGATTTCGA CGATCTGCAA CAACTCGATC GAGTTCGTCA AAGCGCTGTT CGGCATTCAC CGCGCCGGCC TCGTCTGGGT GCCGATCAAC ACCATGCTCG GCCCCGACGA CATGGGCTAC ATCCTCGACC ATGCCGGCGT GAAATTCGCG CTGATCGACG ACAATCTGCA CGGCCAGCCC GATCGCCGCT CGGCGCTCGA GCAGCGCGGC ATCGCGCTGG TCGCGGTCGA TCTCACCGGC AAGGCCGGCG AGGCCGGGCT GAAGAGCTTC AACGAACTGA TCGCCGGGCA GTCCGAGATC GAGCCGGAGG TCGCGTTCGA CGACCGCGAT CTGGCGATGA TCATCTACAC GTCCGGAACC ACGTCGCGAC CGAAGGGCGC GATGCATTGT CACCTCGCGG TAACGATGGC GGTGATGAGC AATGCGATCG AGCTGCAGCT GTCGCGCAAG GACGGCATCA CCGGGCAGTT CCCGCTGTTT CACTGCGCCG CGCACGTGCT GCTGCTGAGC TATCTGGTGG TCGGCGGAAA GATGGCGCTG ATGCGCGGCT TCGATCCCGT CGCCTGCATG GAGGCGATCC AGCGCGACAA GCTCAGCGTC TTCATCGGAC TGCCGCTGAT GTATCAGGTG ATCCTCGACC ATCCGCGGCG CAAGGAGTTC GATCTCTCGA CGCTGCGATG CTGCATCTAC ACCATGGCGC CGATGCCGCG GCCGTTGCTC GAGCGCGCGA TCGCCGAACT GTGCCCGAAT TTCGTCCAGC CCAGCGGCCA GACCGAAATG TATCCGGCGA CCACGATGTC GCAGCCCGAT CGCCAGCTCG CGCGCTTCGG CAACTACTGG GGCGAATCGA CCATGGTCAA CGAGACTGCG ATCATGGACG ATGCCGGAAA CCTGCTGCCG CCCGGCGAGA TCGGCGAACT GGTGCATCGC GGTCCCAACG TGATGCTCGG CTACTACAAG GATCCCGAGG CCACCGAAGC GGCCCGAAAG TTCGGCTGGC ATCACACCGG CGATCTGGCG ATGATCGATG CGCATGGCGA GGTGTTGTTC GTCGACCGCA AGAAGGACAT GATCAAGTCC GGCGGCGAGA ACGTCGCTTC GGTCAAGATC GAGGAGACCC TGCTCGCGCA TCCGGCGGTG ATGAACGCCG CGGTTGTCGG TCTGCCGCAT CCGCAATGGG GCGAGGCGGT GTCGGGCTTC GTTAAGCTCA AGCCCGGCGC CTCGGCGACC GAGACGGAGA TCATCGAGCA CTGCCGCAAA TCGCTCGGCG GTTTCCAGAT TCCGAAAATG GTGCGAATCG TCGAGGAGAT GCCGATGACC GCGACCGGCA AGCTTCGCAA GATCGAGCTG CGCAACCAGT TCACGGATTA CTTCGCGATG GCGCAGACGG GGTGA
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Protein sequence | MTSLEATGGV PGPGRIGRVA IGDILRKSAL RFRDRIALTD GARQVSYDEL ERDANRFANY LVSRGLKPGD KISTICNNSI EFVKALFGIH RAGLVWVPIN TMLGPDDMGY ILDHAGVKFA LIDDNLHGQP DRRSALEQRG IALVAVDLTG KAGEAGLKSF NELIAGQSEI EPEVAFDDRD LAMIIYTSGT TSRPKGAMHC HLAVTMAVMS NAIELQLSRK DGITGQFPLF HCAAHVLLLS YLVVGGKMAL MRGFDPVACM EAIQRDKLSV FIGLPLMYQV ILDHPRRKEF DLSTLRCCIY TMAPMPRPLL ERAIAELCPN FVQPSGQTEM YPATTMSQPD RQLARFGNYW GESTMVNETA IMDDAGNLLP PGEIGELVHR GPNVMLGYYK DPEATEAARK FGWHHTGDLA MIDAHGEVLF VDRKKDMIKS GGENVASVKI EETLLAHPAV MNAAVVGLPH PQWGEAVSGF VKLKPGASAT ETEIIEHCRK SLGGFQIPKM VRIVEEMPMT ATGKLRKIEL RNQFTDYFAM AQTG
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