Gene RPD_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2202 
Symbol 
ID4022687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2461548 
End bp2462414 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content65% 
IMG OID637962397 
Producthypothetical protein 
Protein accessionYP_569338 
Protein GI91976679 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.491469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA AGGCCGTGAT CACCTGCTCG CTGAACGGCG TGCTGACCGA CCCGAAGCAG 
CACCACGTTC CGGTGACGCC GGAAGAGATG GCCCGCGAAG CCAAGGCGGC CTATGACGCC
GGCGCCGCCG TCGTCCACAT CCATTTGCGC AATCAGGCGC CCAACAAGGG GCACCTGCCG
AGCTGGGATG TCGCGGTGTC GCGCGAGATC CAGCAGGCGA TCCGCGAAGC CTGTCCGGGC
ATCATCATCA ACCACACCTC CGGCACCTCC GGCTCGAACT ACGCTGGTCC GCTGGCCTGC
ATTCGCGAGA CCAAGCCGGA GATCGCCGCC TGCAACGCCG GCTCGCTGAA CTATCTCAAG
GTGAGGGCCG ACAAGACATG GGCCTGGCCG CCGATGATGT TCGACAACGC GGTCGAGAAA
ATCCAAGACT TCCTCGACGC GATGAAGGAC GCCGGCACCA TCCCGGAGTT CGAATGCTTC
GACGTCGGCA TCGTCCGTTG CGTTGATATG TATGTCGAGA CCGGGATGTA TAGCGGCCCG
CTCGAGTACA ATTTCGTGAT GGGCGTCGCG TCGGGCATGC CGTCCGATCC CGAGCTGCTG
CCGATCCTGT TGAAGCTGAA GCGCCCGGAG GCGCATTGGC AGGTCACCGC GATCGGCCGC
TCCGAGATCT GGCCGCTGCA TCAGCGCTGC GCCGATCTCG GTGGCCATCT CCGCACCGGG
CTCGAGGACA CGTTCTATCT CGCCAACGGC GAGAAGGTGA CGTCCAACGG GCAGTTGATC
GAGGAGATCG CCGGCTGCGC CCGCCGCGCC GGCCGCGAGA TCGCCAGCCC CGCCGAGGCG
CGCAAGATCT TTGGCGTGCT GCACTGA
 
Protein sequence
MSDKAVITCS LNGVLTDPKQ HHVPVTPEEM AREAKAAYDA GAAVVHIHLR NQAPNKGHLP 
SWDVAVSREI QQAIREACPG IIINHTSGTS GSNYAGPLAC IRETKPEIAA CNAGSLNYLK
VRADKTWAWP PMMFDNAVEK IQDFLDAMKD AGTIPEFECF DVGIVRCVDM YVETGMYSGP
LEYNFVMGVA SGMPSDPELL PILLKLKRPE AHWQVTAIGR SEIWPLHQRC ADLGGHLRTG
LEDTFYLANG EKVTSNGQLI EEIAGCARRA GREIASPAEA RKIFGVLH