Gene RPD_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2200 
Symbol 
ID4022685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2459778 
End bp2460428 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID637962395 
Productglutathione S-transferase-like 
Protein accessionYP_569336 
Protein GI91976677 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.313039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGC TGTACCATTG CCATGGCGCG CGCTCGTTCC GGCCGCTGTG GATGCTGGAA 
GAACTCGGGC TCGATTACGA GCTGAAGATG CTGCCGTTCC CGCCGCGGAT GTTCGCCAAG
GAGTATCTTG CAATCAACCC GCTCGGCACC ATCCCGTTCC TGATCGATGG CGACACCAGG
ATGACGGAGT CCTCCGGCAT CTGCCATTAC CTCGGCTCCA AATACGGCCC GACGCCGCTG
GTGCTCGATG TCGGCGAGCG GGAGTATGGC GCGTATCTCA ACTGGATGTT CTTCAGCGAT
GCGACGCTGA CCTTTCCGCA GACGCTCGTG CTGCGCTACA GCACGCTCGA GCCGACCGAG
CGCCGGCAGC CGCAGGTGGT CGAGGATTAC GCCAAGTGGT TTCTCGGCCG GCTGCGTGCG
GTCGAGGCGG CCGCAGGCCA GACCGAATGG CTGTGCGCAG GGCGCTTCAC CGCTGCCGAT
GTGGTGATCG GCTATGCGCT GCGGCTCGCG GAAAATCTCG GACTCGCGAA GGATTTCGGT
CCGAACGTCG CCGCCTATTG GCAGAGGCTG CAACAGCGCG AGGGCTATCG CCGAGCGCTG
GAGGCGGAGA TTCGCGCCGG CGACGAGCAG AAGGTCGCGC GCCGCGCCTG A
 
Protein sequence
MITLYHCHGA RSFRPLWMLE ELGLDYELKM LPFPPRMFAK EYLAINPLGT IPFLIDGDTR 
MTESSGICHY LGSKYGPTPL VLDVGEREYG AYLNWMFFSD ATLTFPQTLV LRYSTLEPTE
RRQPQVVEDY AKWFLGRLRA VEAAAGQTEW LCAGRFTAAD VVIGYALRLA ENLGLAKDFG
PNVAAYWQRL QQREGYRRAL EAEIRAGDEQ KVARRA