| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2196 |
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| Symbol | |
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| ID | 4022681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2454492 |
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| End bp | 2456609 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962391 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_569332 |
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| Protein GI | 91976673 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.908394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGG CCCAACGCGA TTCGCTTCGT CTGTTGCGCG CGATCCTGAT CGCGTCGGCG
GTGCTGCCGG TGGCGCTGTT CGGTTACGCG GCCTGGCTCG CCTACCGCTC CAACGACGCC
AGCGCCGACG GGCAGATCGA CAAGACCCGC GACATCATCA CCGAACATGC GCTGAAGATC
TTCGAATCGG TGGAGCGCTC GATCGCGGAA ACCGGCGAGG TCATCCGCGA CATGACGGAC
GATCAGATCC GCGCCAATGA GGGCGCGCTT CACGCCCGGC TGAACCGATT GGTTGGCGGC
TCCGATCAGA TCAAGTCGAT GTGGATATTC GACAAGGACG GGCAGACGCT GGTCAACACC
CTGCTTTACC CGTCGCCGCG AACGCAATTC TCCGATCGCG ACTACTTCAA AGCGCATGTC
GGCAAGGATA TCGGCCTGTT CGTGGGCCGC GCGCTGCAGC CGCGCCCGCC CTATGGCGGC
GCCCCGTTCT TCAGCGTCAG CGTGCGCCGC AACGCGCCGG ACGGCAGCTT CGCCGGTGCG
ATCCAGACTT CGATTCTGCC CGAGTATTTC GAGCGCTTCT ACGCCAAGGT CGGCCGCGAG
AGCGGCAGCT ATGCGGCGCT TGTTCGCGAG GACGGCGCCA TCCTCGCCCG CTTCCCCGCC
ATCGAACGTC CCGACCTGAC GGAGAAGTCG GACGGCCTGA TCGGCAGCGC GATGACCGCC
GGCAGCATCG AGGGTACCGT GACCCAGGTC TCCCCGCTGG ACGGAATCGA GCGGCGCGTC
GCCTATCGCA AGCTGCCGAA ACTTCCCGTC TATGTGTATG CAGGGCTGGA GACCAAGGCG
ATCCGGACAA CGTGGCTGTC GCAGCTCGGC GCCTATCTGC TGGTCGGCCT GCCTGCCACC
GCCGCACTGA TTGCGATCGT GATGCTCGCG CTCGCACGAA CGCGCCGGCT CTATGAAGAA
GCCAGCCGGC GCGAGGTGGC CGAGAACGCG CTGAAGCAAT CCCAGCGCCT GGAATCGCTC
GGCCGCCTCA CCGGCGGCGT CGCGCATGAC TTCAACAATC TCCTGATGGT GGTCGGCGGT
TCGGTTCAGA AACTACGGCG GCGGCACAAC GATCTGCAGG ACCGCCGGAC CTTCGACATG
ATCGATTCCG CAGTCGCCAA GGGCGCCGGC CTGACCAGGC AATTGCTGTC GTTTTCGCGC
CGCCACAATG TCGCGGCCAA GCTGGTCGAC CTCGGTGACA GCGTCACCAA ATTCGCCGAC
GTCCTGCGCC AGTCGGTGCG CAGCGACATC GCCATCGAAA TCGATCCGCC TGACGAACCG
ATCATTGTCC AGATCGATCC CAATGAATTC GAGATCGCGC TGCTCAACCT CGCGCTCAAC
GCCCGCGATG CGATGCCGGA CGGCGGCCGT ATCACGATTT CGATCAGGAC GGAGACACTG
AAGAACTTCG GGCCGCGCCG GCTGACCGGC GACTATGCCG TTCTCGGATT CGCCGACACC
GGCTTCGGCA TTGCCGAAGA GATCCGCGAC CGCATCTTCG AACCTTTCTT CACCACCAAG
CCGGTCGACC GCGGCACCGG CCTCGGCCTC AGCCAGATCT ACGGCTTCGC TCAGCAGTCG
AATGGGGCGA TCACGGTCGA CAGCCACATC GGTCGCGGCA CGCGCTTCGA CCTTTTCCTG
CCGCGTTCGA CGGAGCGCCC GGAACAGGAT CCCGACGTCC CCGATGCGGC GCCGGCGCAG
GCGAAGTCGT CGACGCTGCT GCTGGTGGAG GACCATCCGG ATGTGGCGGC AATCGCCACC
GACTATGCGG AGCAATGCGG CTTCACAGTC GTCAAAGTCA GCTCTGCTGA AGACGCGATC
GATCTGCTCA ACAAGCGCAA GGACATCGAT CTGGTGTTCA GCGACATCGT GATGCCGGGA
ATGAGCGGGC TCGAACTCGG GCGACTGATC CGCGAACACC ATCCGGAGAC GCCGGTTGTG
CTGGCTTCGG GTTACAGCGA CCGCAGCGCA TCCGCGCTGA GCGAAGGATT CCCGCTGCTG
CAGAAGCCTT ACACGCTGGA GACGTTGCGC AAGGCGCTGA TCCTTGCGCT GCAAAGCGCA
GAGACGACAC ATATCTAG
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| Protein sequence | MLTAQRDSLR LLRAILIASA VLPVALFGYA AWLAYRSNDA SADGQIDKTR DIITEHALKI
FESVERSIAE TGEVIRDMTD DQIRANEGAL HARLNRLVGG SDQIKSMWIF DKDGQTLVNT
LLYPSPRTQF SDRDYFKAHV GKDIGLFVGR ALQPRPPYGG APFFSVSVRR NAPDGSFAGA
IQTSILPEYF ERFYAKVGRE SGSYAALVRE DGAILARFPA IERPDLTEKS DGLIGSAMTA
GSIEGTVTQV SPLDGIERRV AYRKLPKLPV YVYAGLETKA IRTTWLSQLG AYLLVGLPAT
AALIAIVMLA LARTRRLYEE ASRREVAENA LKQSQRLESL GRLTGGVAHD FNNLLMVVGG
SVQKLRRRHN DLQDRRTFDM IDSAVAKGAG LTRQLLSFSR RHNVAAKLVD LGDSVTKFAD
VLRQSVRSDI AIEIDPPDEP IIVQIDPNEF EIALLNLALN ARDAMPDGGR ITISIRTETL
KNFGPRRLTG DYAVLGFADT GFGIAEEIRD RIFEPFFTTK PVDRGTGLGL SQIYGFAQQS
NGAITVDSHI GRGTRFDLFL PRSTERPEQD PDVPDAAPAQ AKSSTLLLVE DHPDVAAIAT
DYAEQCGFTV VKVSSAEDAI DLLNKRKDID LVFSDIVMPG MSGLELGRLI REHHPETPVV
LASGYSDRSA SALSEGFPLL QKPYTLETLR KALILALQSA ETTHI
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