Gene RPD_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2190 
Symbol 
ID4022675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2448254 
End bp2449378 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content62% 
IMG OID637962385 
Productacyltransferase 3 
Protein accessionYP_569326 
Protein GI91976667 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAG CCAGCAGTTT CATCCCACGC CTCGAATCGA TGCGCGGCGT CGCCGCACTG 
CTGGTCGCGG CGTCGCACGT GGTTCAGGCG CCGACGGGGG CGAATAGCGG ATTGCTGACC
AACCCCGGCG TCGAACTCGA CGAGTTGAGC CGTTTCGCCT ACCGGACGAT CGTGCATTGC
GTCGACGGGC TTCAGGCGGT GATCTTCTTC TTCGTCCTCA GCGGGTTCGT GCTGACCCGT
TCATTGGCGA AAGAAACCCA CCCGTCGTTT GCGCAAGCGG CGGACTTTGG GATCGCACGG
CTGTTCAGGC TGTATCCGGC GATCATCTTT GCGATCGGCC TGTTCGCCAT CGCGATGGCG
CTCGCCGGCG CGACCATCCC GCTGTCCACC GTGCTGAAGA ACATGGCGCT GATCGACACC
TCGCTCAACG GCGTCATGTG GTCGCTGCAG CTCGAGATGC TCGCGATCCC GTTGATCTAC
ACGATGTATT GGCTGCTGAT CCGCCGCACA GCGCTCGGCA TCACGCTGTC GATTGCGATC
TCGCTGACCC TGGTGGTCGT GTCGTTCGAT CCGGCCATCC ACAAAATTCT CGGCGATCCG
CCGCTGCAAT TCTACTACGC CTTCACCTTC GGCTGTTTCT GCGCCGTAGC GTCGGGACGG
CTGGCGTCGC GGCTGTCACC GACCCAGGTC AATGTCGCGC TCGCGGTCTT CCTCATTCTC
TTCTTCACAG CGCGTCCGCT GCTGGGCCCC GCCTCGACCT GGCGCTTTCT GGTCAATTCA
ATGTGCGCAT GGATGCCGAT CCATCTGGTC GCCTACGGTC CGCGCGCGTC TTTGCTCAAT
CTCCTCGACC ATCCGATCGC GCATTGGCTG GGCAAGCTGT CGTTCAGCTA CTACCTGTTC
CATTTCCTGA CGATCACGCC GGTGTGGAAT CATCCGGAGT TTCTGATCTG GATGATCCAG
GATGTCGGAC TGCCGCGGCT GGTGGTCGCC CTCCTGCTGT TCGTCGTGAG CACGGCGGTC
GCGTTGGCGC TTGCTAACAT TTGCCACAAT TTCGTCGAAC TGCCCGGAAT TCGCCTTGGG
CAACGCGTCC GCGCCCTGCT CGTCCCGCGG CCGCCGGCGG GCTGA
 
Protein sequence
MSRASSFIPR LESMRGVAAL LVAASHVVQA PTGANSGLLT NPGVELDELS RFAYRTIVHC 
VDGLQAVIFF FVLSGFVLTR SLAKETHPSF AQAADFGIAR LFRLYPAIIF AIGLFAIAMA
LAGATIPLST VLKNMALIDT SLNGVMWSLQ LEMLAIPLIY TMYWLLIRRT ALGITLSIAI
SLTLVVVSFD PAIHKILGDP PLQFYYAFTF GCFCAVASGR LASRLSPTQV NVALAVFLIL
FFTARPLLGP ASTWRFLVNS MCAWMPIHLV AYGPRASLLN LLDHPIAHWL GKLSFSYYLF
HFLTITPVWN HPEFLIWMIQ DVGLPRLVVA LLLFVVSTAV ALALANICHN FVELPGIRLG
QRVRALLVPR PPAG