Gene RPD_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2187 
Symbol 
ID4022672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2441461 
End bp2442096 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content63% 
IMG OID637962382 
Producthypothetical protein 
Protein accessionYP_569323 
Protein GI91976664 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03424] urea carboxylase-associated protein 1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGA TTTCCGTCTC CGCCCGCATC GTGCTCGATG CCACCGTTCC CGCCCGCGCT 
CCGTGGTCGG CGATAATCCG CAAGGGACAG ACCTTGCGGA TTGTCGACAC TCACGGCCAA
CAGGCTGTCG ACACGCTGTT CTTTGCGGCC GACGATTACG GCGAACGCTA TAGCGGTCAG
GACACGCTGC GCGCCCAGGG CGCAGCCTAC GTCTCGACCG GCACGCGGAT CATGTCGACC
GAGGGGCGCA CCATGCTGCG CATGGTCGTC GATAGCTGCG GCCTGCACGA CACCTCCGCC
GGCGCCTGCT CCTGCGAGAG CAACACCGTG CGGTTCGGCC ACCAGACCAA ATATCTGCAC
GCCTGCCGTG AGAACTTCCT GATCGAGGCC GCCAAGCACG GCCTGTCGAA GCGCGACATC
GTGCCGAACC TGAACTTCTT CATGAACGTA TCGATTGATC CCACCGGCAA TTTCACCGTG
GTCGACGGCG TCTCCAGGCC CGGCGACTAT GTCGAGATGG TCGCCGAGAT GGATGTGCTC
TGCCTGATCT CGAACTGTCC GCAGGTCAAC AATCCCTGCA ACGGCTTCTT TCCGACGCCG
ATCCAGGTGG TGATCTACGA GACGAGCGAG GGCTGA
 
Protein sequence
MAAISVSARI VLDATVPARA PWSAIIRKGQ TLRIVDTHGQ QAVDTLFFAA DDYGERYSGQ 
DTLRAQGAAY VSTGTRIMST EGRTMLRMVV DSCGLHDTSA GACSCESNTV RFGHQTKYLH
ACRENFLIEA AKHGLSKRDI VPNLNFFMNV SIDPTGNFTV VDGVSRPGDY VEMVAEMDVL
CLISNCPQVN NPCNGFFPTP IQVVIYETSE G