Gene RPD_2186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2186 
Symbol 
ID4022671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2440616 
End bp2441458 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content63% 
IMG OID637962381 
Producthypothetical protein 
Protein accessionYP_569322 
Protein GI91976663 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03425] urea carboxylase-associated protein 2 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.977341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGA CCGAGCAAGA TAAGGCCGAA GTCGAAGCCA ACCGCCGACG TTACGAACAG 
CACAAGGCAA TGGGCCAGCA ACAGGCCTCG AAGTCGCTGC CTCCGCCGAC GCCGCGCGAC
GGCGCACCGA TTTCAGCGGA TGCGATCATT CATCGCGAAG TAATCCCCGG CGGTTGGTAC
ACCGTGACCA AGCTCAACCG CGGCGAAGCG CTGCGGATCG TCAACGCGAG CGCCAAGGCC
TGCGTCAGCA TCCAGGCCTG GAATGCCGAT GATCCGAGCG AGCGGCTGAA CCACGCCGAC
ACGATCAAGG TGCAATGGGC TGCTTCCTTG CGCAAAGGCC GTGTGATCCT GTCCGATATG
GGCCGCGTGC TGTTCTCGAT CATCCAGGAC AGCGGCGCTG CGCATGACAC GCTGGCCGGG
GGCTCCAATG CTGCAACAAA CGCCGCACGC TATGGCGCCG GGAGCTTCCG CAACACTCGC
GAGAACTTCG TCCTCGCGGC TGGAAAGCTC GGGCTCGACC GTCGCGACGT GCATCCCTGC
ATCGCTTTCT TTGCGCCGGT CAGCGTCGAT GCGCAGGGAC GCTTCGAATG GCAGGGCGAG
CGCCGCAACC CGGACGACTT TGTCGACCTG CGCGCCGAAC TCGATCTGCT GGTCGCTCTC
TCGAACTGTC CGCATCCACT GGATCCATCT CCGGACTACG CGCCCGGACA GGTGGAAATC
GTGCGTTACC AGGCGCCAGA ACCTGCAGAT GACGATCTGT GCCGTACGGT GAGCCTGGAA
GCTAAGCGCG CATTTGAGAA CAACGCATTC TGGCTGGCCG CCGGCAGCGC GGGGAGGGTT
TGA
 
Protein sequence
MILTEQDKAE VEANRRRYEQ HKAMGQQQAS KSLPPPTPRD GAPISADAII HREVIPGGWY 
TVTKLNRGEA LRIVNASAKA CVSIQAWNAD DPSERLNHAD TIKVQWAASL RKGRVILSDM
GRVLFSIIQD SGAAHDTLAG GSNAATNAAR YGAGSFRNTR ENFVLAAGKL GLDRRDVHPC
IAFFAPVSVD AQGRFEWQGE RRNPDDFVDL RAELDLLVAL SNCPHPLDPS PDYAPGQVEI
VRYQAPEPAD DDLCRTVSLE AKRAFENNAF WLAAGSAGRV