Gene RPD_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2182 
Symbol 
ID4022665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2435345 
End bp2436796 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content67% 
IMG OID637962376 
Producthypothetical protein 
Protein accessionYP_569318 
Protein GI91976659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.781308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGACC TCATCACCGC CAAAGTCCTG GCCAAAGCCA TCCGCGACCA GCGCGAAGGC 
CAGCGCTACG ACATCATCGA TAGCCGGGTC CCGGGGCTCG AGCTCCGCGT GAAGCCGCGC
GGCGTACGGT GGTCGATGCG GTGCCGGCTC CATGGCGACC GGAAGCGCTA CGACCTGGGG
CCGGCCGTCG CCGGCGACCA GGACATCGGC GGCCTGTCGA TCGATGGGGC CAGGTCCCGC
GCAGCGCGGA TCGCCGAGAT GGTCCGGGCC GGACATAACC CGGCCACTTA CCTGGCGGCG
ACGGCCGCCG GCGTCTCAAT CGAGACGCAG CGCCGCGTCG AGGCCGAACG GCCGAAGCCG
TCTTGGACCT GGGAGACGTC GGTCGAATCC TTCCTCGCCG ACGTGATGCG CACCAATCGC
CCGGACACCC ATCGCGACTA CCGCGGCAAG CTCCGGGTCC CCGAACTCGG CCGGTTCGCC
GGCAGGCAGG TCGCCGGAAT CACCCGCAAC GAAATGGCCT CCGCGATCGC CGCAGTCCAC
AGCCGCGGCG CTGAGGTCAT GTCCGAGGGA ATGGTCCGCG TCATCAAACG ATTGTGGTCC
TGGCTCTCTG AAGCGGTCCG CCAGGACGCG ACGTCGGTGG CCGACGGCGT GATGATCAAG
CTCGCGGCTC CTGCCCGCAC AAGATCCGAA ATCGGTGAGG AAGCCTTCGA CCCAGACGCA
GAGGCCGGCG ACGCGCCGCC GGAGATCGAG ATCGGCCGCG CACTGGCCCT CGCCCGCCTC
GGCTGCCTGC CAGATCGGAT CGGGCTTGGG ATCCAGCTTC TTATCGGGAC TGTCCAGCGC
CGGCGGGCGG TCACCGGAGC GAACCGCTGG AGATTTCGCA GCTACGCCGA GGTCAACAGC
GAGTGCGCCT GGTACATCCC GCCTTATTTC AGGAAATCAG GGACGAAGCG GGGGACCCGC
AGCCATCTCG TCCCGTGCGT CGCCTGGGTC TCCGATGTCG TCGAGCGCCT CGATCGCATG
TCTGACTTCG AGGGCAGCGA GGGGTGGCTC TTCCCTGCAG GAGCATCGAA CAAATCGAAG
CGTCAGCACG CCGAGGCCGG GCTGCTAAAC GACTGGATTG GAGCGATGCC AGGCGTCGGC
TGGTCGCCGC ACGGCGTCAG GTACGCCTTC GCGTCATACG GCGAGCGCGA CCTCGGATTC
GCTCCGAGCG AAGCAAAATT GATCCTCGAT CACATGGAAG GTGTGGAGCC GACCGACGTC
ACCGGGCAGT TCTACAGCAG CGACCCGAAG ATTGGCCGGA AGCGATCCAT GATGCGGGCA
TGGACGGACT GGTGCGACGA CTGGTGCAAC CGCGCGATCC GCGAAAATCC CGCGCTGCGC
GATCGCGATC TGATGTCCGA CGAGATCAGG CGGGTGCGGT ACCGGCGTGG CTCCGACGAT
GAGGCGGCGT AG
 
Protein sequence
MPDLITAKVL AKAIRDQREG QRYDIIDSRV PGLELRVKPR GVRWSMRCRL HGDRKRYDLG 
PAVAGDQDIG GLSIDGARSR AARIAEMVRA GHNPATYLAA TAAGVSIETQ RRVEAERPKP
SWTWETSVES FLADVMRTNR PDTHRDYRGK LRVPELGRFA GRQVAGITRN EMASAIAAVH
SRGAEVMSEG MVRVIKRLWS WLSEAVRQDA TSVADGVMIK LAAPARTRSE IGEEAFDPDA
EAGDAPPEIE IGRALALARL GCLPDRIGLG IQLLIGTVQR RRAVTGANRW RFRSYAEVNS
ECAWYIPPYF RKSGTKRGTR SHLVPCVAWV SDVVERLDRM SDFEGSEGWL FPAGASNKSK
RQHAEAGLLN DWIGAMPGVG WSPHGVRYAF ASYGERDLGF APSEAKLILD HMEGVEPTDV
TGQFYSSDPK IGRKRSMMRA WTDWCDDWCN RAIRENPALR DRDLMSDEIR RVRYRRGSDD
EAA