| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2142 |
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| Symbol | |
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| ID | 4022625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2400563 |
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| End bp | 2401834 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637962336 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_569278 |
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| Protein GI | 91976619 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.143725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCCA GGATCGCCAC GCAGCTTGCG TGGGCGGTTG CGCTCTTCGT TGGCGTCTCG
CTGACCGGAG AAGCGCGCTC GCAAACTCTC ACTATGGGTA GTGCGCTTCA GCGCGCGCTC
AACGCCAGTC CTCGGCTAAC TGCCGCCGAG CGGGACGTCG GCATCGCGCG TGGCCAACGA
ATTCAAGCGG GTGCGTTCAT CAATCCGAAC GTTTCCTACG AACTGGACAA TTCGTTCGGT
TCCGGGGCCT ACCGTGGCAC CAGGTCGGCG GAGTCTACCC TGCAAATCAG CCAGATGTTT
GAGTTGTGGG GCAAACGAGA CGCGCGGATT GCGGCCGGTC AGGCCGGCCT CGACGCGGCT
GCCATCGGAC GCCAAGCGGT TCGTCTTGAA GTGCTGTCAG AAACGGCAAT CGCCTTCGTT
ACTGCACTCG GCCTTCAGCG GCGAATCCAG ATCCTGGATG AGCAGGTCCA AGCCATCGAC
AAGATTACGC CGCTCCTAAA GCGTCGGGTA GAAGCCGGTG CATCGTCTGT CGCCGAGACT
GGCAGGGCCG AGGTTGCATC CGCACTGGTC AAGGCAGACC GTGAGCGAAC GAAGTCGGCG
CTTTCAAGCG CCCGGCGCGA ACTCGCGATT TTGATGGGAG ACAGCGCGCC GAAGTTCGCG
GCGGTGTCCG GTCGCCTCGA TGTCACCGGG AAGCCGCCTT CGTTTCATTC GGTCATATCA
GCGATCGACG CAAATCCGCA GTTGGTTCGC TGGAAGGCAG TATACGCCCA GCGCAACGCC
GAACTGTTGC TGGCACGACT GCGGCCCTAT CCCGACGTGA CGGTCTCGGC CGGTATGCGC
CACTACAACG AAACGGGCGA TAGCGCTGTC CGATTGTCGC TTTCGGTGCC GCTTCCGGTG
TTCGACCAGA ACCAGGGCAA TATCCTATCC GCGCAAGAGA CGCTGGCGAG GACTGCCGCT
GAACGCCAGG GCAACCGAAA CACGCTGATC CTCGTGGCGG GACGTGCATA CGATTCGCTG
AGGGGATCGC TTCGCGAACT CGCGATCCTG CGCGAGGTCG CAATTCCGAA ATCCAAGGAC
GCCGCGGAAG CGATATCCGA AGGGTACGGA CAGGGGCGAT ATACGCTACT CGAAGTGCTG
GATTCTCAGG CCAGTGTCGC GCAGGCGCGA CTTCGAGAAC AGGAGGCGCA GCAGAACTTT
CACGTCGCCG TCGCGACCAT CGAAGGGCTG GTCGGTAATC CATTCGCGTT GGCGCGGGAG
AGCGCAAGAT GA
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| Protein sequence | MLSRIATQLA WAVALFVGVS LTGEARSQTL TMGSALQRAL NASPRLTAAE RDVGIARGQR
IQAGAFINPN VSYELDNSFG SGAYRGTRSA ESTLQISQMF ELWGKRDARI AAGQAGLDAA
AIGRQAVRLE VLSETAIAFV TALGLQRRIQ ILDEQVQAID KITPLLKRRV EAGASSVAET
GRAEVASALV KADRERTKSA LSSARRELAI LMGDSAPKFA AVSGRLDVTG KPPSFHSVIS
AIDANPQLVR WKAVYAQRNA ELLLARLRPY PDVTVSAGMR HYNETGDSAV RLSLSVPLPV
FDQNQGNILS AQETLARTAA ERQGNRNTLI LVAGRAYDSL RGSLRELAIL REVAIPKSKD
AAEAISEGYG QGRYTLLEVL DSQASVAQAR LREQEAQQNF HVAVATIEGL VGNPFALARE
SAR
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