Gene RPD_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2140 
Symbol 
ID4022623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2399456 
End bp2399977 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content54% 
IMG OID637962334 
Productregulatory protein, MarR 
Protein accessionYP_569276 
Protein GI91976617 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.203866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACACG GACCGCCTGA ATTTGACCCC ATGGATGTCG GGTTTACAAA TTGCGGAGAC 
AAAACCAAGA GATCTGATAA GCATCTTATG TGGAATTTGA TGGCGGTCAG TTCTTCCTTG
GTGAGGGTGG CTGAGTTACT TGGCCGGCGA TTGGGGATTA CAGGTTCTCA ATGGCTTTTG
CTGGAGGCTA TCAGGTTCCT CTCGCGCGGC GACGGCGTAC CCGTTGGCGA AGCTGCCGCT
CTGCTCGATG TAAAGGGTTC CTTCATTTCT TTCCAAGCAA GGAGTTTGGA GGAGAGGGGT
TTCCTTTGCA GGAAACAGTC CGGCAGAGAC AAACGTGTTT TTCTATTGTC TTTGACCGAG
AACGCGGAAG CAAAGCTGGG TAGTCTTGAG GCGGTGCTGT TTAGTATCGA GCCCCTGCTG
CGGGGAGGGC TTGACGATGA CGCCATTCGA GAAACTGCGA ATAGGTTGGA CGGCATGCGC
CGCCGCTTGG CGCGCGCGAG AGGGAGAGCG AAAGAGAACT GA
 
Protein sequence
MRHGPPEFDP MDVGFTNCGD KTKRSDKHLM WNLMAVSSSL VRVAELLGRR LGITGSQWLL 
LEAIRFLSRG DGVPVGEAAA LLDVKGSFIS FQARSLEERG FLCRKQSGRD KRVFLLSLTE
NAEAKLGSLE AVLFSIEPLL RGGLDDDAIR ETANRLDGMR RRLARARGRA KEN