| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2138 |
|---|
| Symbol | |
|---|
| ID | 4022621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 2397084 |
|---|
| End bp | 2397818 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637962332 |
|---|
| Product | flagellar basal body rod protein |
|---|
| Protein accession | YP_569274 |
|---|
| Protein GI | 91976615 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4786] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGACA AAACCGTTAT TGGGCTTTCG CGGCTGATTG CGCTTCAACA GCAGGTCGAT
AACTTGGCGC GCAACGTCGC AAACCAGAAC ACCACCGGCT TCAAGCGCGA GGGCATCCGA
TTTCTCGAAT ATCTGACAGA CGCAAAAGAG GCCGATGATA TCCCTTCGGC GCCAAAGAGA
TCGCTCGTAG CGGTCACCGG ATACACTGAC TTTTCCGCAG GCTCGCTTCA GCTCACCGGA
AACTCCACCG ATGCCGCCGT GCTTGGAGAC GGCTTCTTCG TCGTCAGGAC CAGTCGAGGG
GATCGCTACA CCCGAAACGG GGCGTTCACC CTCGACAAAC AGGGGCGCCT GGTCACGCTG
TCGGGGGATC TCGTGCTCGC CGCCAACGGC ACAATCAAAG TGCCCTTGAC CGACGTGAAC
CTCAGCATCG GCACGGACGG AACTATTTCG ACGGCGCGAT CGATCATCGG GCGGCTTCGG
GTCGTGAAAT TTGACGATCC CCGCTCTCTG GTCGCCGAAG GTACGGGACT CTTCGCGTCA
GGGAGCCCGC CGATAGAGCT GAATGCGGGA AGCATTCGAT TAGCTACAAA TGCCCTCGAA
CGATCGAACG TAAACTCCAT CCGCGAGATG AGCGATCTCG TAGCCGCGAC CCGCGCCTAC
GAGCAAGTCG CGAATGTAGT TCTGAAAGAC GGCGATCCAA ACGAGCTGAA AACGCTCGCC
GGAGAGGATC TATGA
|
|---|
| Protein sequence | MSDKTVIGLS RLIALQQQVD NLARNVANQN TTGFKREGIR FLEYLTDAKE ADDIPSAPKR
SLVAVTGYTD FSAGSLQLTG NSTDAAVLGD GFFVVRTSRG DRYTRNGAFT LDKQGRLVTL
SGDLVLAANG TIKVPLTDVN LSIGTDGTIS TARSIIGRLR VVKFDDPRSL VAEGTGLFAS
GSPPIELNAG SIRLATNALE RSNVNSIREM SDLVAATRAY EQVANVVLKD GDPNELKTLA
GEDL
|
|---|
| |