| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2137 |
|---|
| Symbol | |
|---|
| ID | 4022620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 2394358 |
|---|
| End bp | 2396919 |
|---|
| Gene Length | 2562 bp |
|---|
| Protein Length | 853 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637962331 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_569273 |
|---|
| Protein GI | 91976614 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA CGCTTATCGT AGACATTCCG ATCATTCTGC CCGGCATCCC CGACGTGAAC
GACGCCTGCG TCGAACGGCT GATGTCTCGC ATCCAGGCGA GGCCGGGGGT GGAGCATGTC
CACGTGACTT CGGGGCGCAG CGGCGAGCCA TCGCAACTCT GCGTTCACTA CGATCCGGAA
GTCATCACGC TCGCACGAAT CCGCGAGTTT GTCGTCGGCA CAGGCGCGGA GATTTCCGAT
CGTTTCGGTC ATCTCCTACG AAGAGTGGAA GGCGTCCGTC ACTCACGCCG AGCGCGCACG
ATATCGCAAA GCCTGCGCGA CCTGCAGGGT GTGGTCGAGA GCGAAGTGAC CGTCAACGGA
GTGCTGCGCG TCGAATTCGA TCGCACCCGA GTAACGGAGA GAGATCTGTT CGATAAGCTT
GCGTCGATGG GCGTAACGCC CGTCCGCAAG GATGCAGCGC GCGGGGCATC CAAATCGGTC
GACGCAAGCG ACGCGAACGA GCCCATTTCG AAAGATGTAG CGGAACACGA TCATCCGAAG
CATGAAGGTG TCGCGGGGGA TCACGATCAT TCGCATGGCG CTCTATTGGG ACCGAACACC
GAACTCATAT TCTCGCTCGC CTGCGGAGCC CTTCTGGCGA TTGGCTTCGC TCTGGAGAAG
CTAGTACCCG CCGCACCGGG TTGGCTGCCG ACCACGCTGT ATCTCGTGGC GGGCGTCTTC
GGCGGCTTCT ACACACTGCG GGAAGCCTTC GAGAACCTCA GAGAGAGACG GTTCGAGATC
GACACCCTGA TGCTGGTCGC CGCAGCCGGC GCGGCTGCTC TGGGCGCGTT CGCGGAAGGA
GCGCTACTGC TGTTCCTGTT CAGCCTCGGC CACGCGCTGG AGCACTACGC CATGGGCCGG
GCGAAGCAGG CAATCGAGGC GCTCGCACAG CTTGCGCCCC CAACCGCCAC GGTGCTCCGC
GATGGGCAAA GCCGCGAGAT CCACGTCGAA GAACTTTTGG TCGGAGACCT CGTCCTCGTC
CGTCCGAACG AACGTTTGCC AGCAGATGGA TTCGTCGCCA AAGGCGAGAC AAGCATCAAT
CAGGCACCCG TCACGGGCGA AAGCATACCC GTCGACAAAC GGCCGGTGGA GGATGCCGGC
TCCGCGCGAC AGAGACCAGA CCAGGTCGAC GCGTCCTCGC GCGTGTACGC AGGTACGATC
AACGGCGCCG GCGCGATCGA GATCGAGGTC ACCCGCCTCT CCCATGAGAC CGCTCTCGCT
AAGGTGGTCC AGATGGTCAG CGAGGCAGAA ACCCAAAAAT CGCCGACGCA GCGGTTCACC
GACAGATTTG AAAGGATCTT CGTTCCGGTC GTGCTGGCCC TGGCGGCGCT TCTGCTGGCC
GCGGGCTTGG TGATCGATGA GCCTTTCAGC GCCACCTTCT ACCGGGCCAT GGCAGTTCTG
GTGGCGGCCA GTCCCTGCGC GCTGGCCATC GCGACCCCCA GTGCCGTCCT GTCCGGGGTG
GCCCGCGCCG CGCGCGGAGG TGTTCTCGTG AAAGGAGGGG GGCCCCTCGA GAACCTCGGT
TCGCTAAAGG CGATCGCGTT CGACAAGACC GGGACATTGA CCGAAGGACG CCCGCACATT
ACCGACGTTG TGGCGGTCGA CGGGGCCTCT ACGGACGAAC TACTCACCGT CGCGGTGGCT
GTCGAACGGC TGAGTGACCA TCCGCTCGCC GCCGCAATCG TGCGCGACGG CCACTTGCGA
TTGGGGCAGC GCGAAGTTCC GGAGGCGCTC GGCCTCACGG CCCTGACAGG CCGCGGCGTG
ACGGCACAAC TCGCAGGGGT ATCCGTCGCC ATCGGCAAGG CGGAGATGTT CGGGATCGAC
GAGATCGCCC CATTGGGTGC AGCAGCGCTC GCGGCGATCG CCAGTTTGCG CGAAGCCGGC
CGCACGACCA TGGTCGTGCG TTACGGCGAC AGAGATCTCG GGGTGATCGG CCTGATGGAT
ACGCCGCGCG CTGCAGCCCG CGGCGCCCTC GCTGAATTGC GCGCACTCGG CATAAAACGA
TTGATCATGA TATCCGGCGA TCATCAAAAA GTCGCCGAAG CGATCGCCGG GGAGGTTGGG
ATCGACGAAG CATGGGGAGA CCTCATGCCG GCGGACAAGG TCGCTGCGAT CAAGAAACTG
AGCGTCGAAC AGAAAGTCGC AATGGTCGGC GACGGAGTCA ATGATGCGCC GGCGATGGCG
AATTCTACCG TGGGCATAGC AATGGGAGCG GCCGGCTCGG ACGTCGCGCT TGAGACCGCG
GACGTCGCCC TGATGGCAGA CGATCTAAGT CACTTGCCAT TTGCCGTCGG ATTGAGCCGC
CAGACGCGAT CCATCATCCT CCAAAATGTC GTCGTCAGCC TGGGCGTCGT CGCAGTATTG
GTCCCCTCCA CCATTTTCGG CCTCAGTATC GGCGCGGCCG TCGCGATGCA TGAGGGATCC
ACTTTGCTAG TGGTGGTGAA TGCTCTTCGT TTGCTCGCCT ATAGAGACAC GAAGCGGAAC
GTGCAATCGG ACAGCGAATA CGGCTCGGGG CCCGATGCCT GA
|
|---|
| Protein sequence | MTETLIVDIP IILPGIPDVN DACVERLMSR IQARPGVEHV HVTSGRSGEP SQLCVHYDPE
VITLARIREF VVGTGAEISD RFGHLLRRVE GVRHSRRART ISQSLRDLQG VVESEVTVNG
VLRVEFDRTR VTERDLFDKL ASMGVTPVRK DAARGASKSV DASDANEPIS KDVAEHDHPK
HEGVAGDHDH SHGALLGPNT ELIFSLACGA LLAIGFALEK LVPAAPGWLP TTLYLVAGVF
GGFYTLREAF ENLRERRFEI DTLMLVAAAG AAALGAFAEG ALLLFLFSLG HALEHYAMGR
AKQAIEALAQ LAPPTATVLR DGQSREIHVE ELLVGDLVLV RPNERLPADG FVAKGETSIN
QAPVTGESIP VDKRPVEDAG SARQRPDQVD ASSRVYAGTI NGAGAIEIEV TRLSHETALA
KVVQMVSEAE TQKSPTQRFT DRFERIFVPV VLALAALLLA AGLVIDEPFS ATFYRAMAVL
VAASPCALAI ATPSAVLSGV ARAARGGVLV KGGGPLENLG SLKAIAFDKT GTLTEGRPHI
TDVVAVDGAS TDELLTVAVA VERLSDHPLA AAIVRDGHLR LGQREVPEAL GLTALTGRGV
TAQLAGVSVA IGKAEMFGID EIAPLGAAAL AAIASLREAG RTTMVVRYGD RDLGVIGLMD
TPRAAARGAL AELRALGIKR LIMISGDHQK VAEAIAGEVG IDEAWGDLMP ADKVAAIKKL
SVEQKVAMVG DGVNDAPAMA NSTVGIAMGA AGSDVALETA DVALMADDLS HLPFAVGLSR
QTRSIILQNV VVSLGVVAVL VPSTIFGLSI GAAVAMHEGS TLLVVVNALR LLAYRDTKRN
VQSDSEYGSG PDA
|
|---|
| |