| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2128 |
|---|
| Symbol | |
|---|
| ID | 4022611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2383472 |
|---|
| End bp | 2383939 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637962322 |
|---|
| Product | transposase, mutator type |
|---|
| Protein accession | YP_569264 |
|---|
| Protein GI | 91976605 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.449064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGTAG CCGTCGGCGT CAACAGCGAC GGGCGCCGTG AAATTCTCGG GCTAGACATC
GGCCCCTCGG AAGCCGAGAC GTTCTGGACC GCGTTCCTGC GCAAGCTCGT CCGCCGCGGC
CGGCGCGGCG TCAAGCTGGT TATTACCGAC GCCGATGAAG GCCTCAAGGC CGCGGCCAGC
AAGGTCTTCA TCGCCACCCG GCAGCGCTGC CGCGTCCACT TCATGCGTGA CGTCCTTGCG
CACGCCGGCA AGAGCGGACG CCGCGTCGTC TCCGCGTTCA TCGCCACCGG GTTTGCGCAG
GACGATGCCG AGGCCGCGCG GGCGCAATGG CGTCGCGTCG CCGATCAACT GCGCCCAAAA
CTGCCGAAGC TCGCGGCGTT CCTCGACGAC GCCGAGACCG ACGTGCTGGC CTATATGAGC
TTCCCGCCGG CGCATCGCAC CAAGCTGCTT TCCACCAACC CGATCTAG
|
|---|
| Protein sequence | MIVAVGVNSD GRREILGLDI GPSEAETFWT AFLRKLVRRG RRGVKLVITD ADEGLKAAAS
KVFIATRQRC RVHFMRDVLA HAGKSGRRVV SAFIATGFAQ DDAEAARAQW RRVADQLRPK
LPKLAAFLDD AETDVLAYMS FPPAHRTKLL STNPI
|
|---|
| |