| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2126 |
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| Symbol | |
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| ID | 4022609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2376912 |
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| End bp | 2381669 |
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| Gene Length | 4758 bp |
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| Protein Length | 1585 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637962320 |
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| Product | ATPase |
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| Protein accession | YP_569262 |
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| Protein GI | 91976603 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.561278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCA AATTCTTTCT TCCGCAGGGC CCCCAGCCAA CGGAAATGGC AGGGCTTGAG
GACATTCGCG CAACCTTTCC AAAGCATTGG AAGGGGTACG CGAATTTCGT CATGCGCCAA
CCGCAGCGGC GGGGCCAGGA CCGCGAAATC GATATTGTGA TCGTCACACC AGATCGCATC
ATTCTCGTTG ACCTCAAGCA TATTCGTGGG CGCATCGAGA ATCGAGGAGG CATCTGGCAC
CGCGACGCAG ACATTATCGG TGCGTCACCA GCTCATAAAA TCCGCGACAA TGCCAAAGTG
CTCGCGTCGT TGATAAGGTC GGAGATCCAC CATTTTCCCG CAGTGCCGCC TGTCGAAAGC
CTTGTCGTCC TCACACATCC GCAATGCGAT CCTAGCGGTC TCGATCAGGT CGAACGTGAT
CGAACGCTCA AGCTTTCTGA TTTCCTGAAG ATTACGCGTG AACAGAATTT TCGGAACCTC
TTCACCGGTC CAACCAAGTA CTCTGAGTCC AACTCGCTCT GCTCGGGGCA ATGTGGAAAC
GCTCTCCAAA AGTTCTTCAG CAACGGAAAA CTCTTTGAGC CCCGGAAGAC GCGTTTTCAT
GGCTTCATGC CAGTTGGTGA TCCGGCTTTC AAGCATCCTC TTTTTGAAGA GTTTTCCTGC
CATCAATCCG AAGATCCGAA CTACACGGGC CTTCTTCGGC TGTGGGACTT TAGTGTCGAT
GGCGAATTTA TCGTTGAAGA AGCGCGTCGC CCGATCGCTG AGCGGGAGAG AGCGGTTCTG
GGGCATATTC GGGTTCAAGA TCCAGCCCTC TATGAGAACT ATGTTCTCCG CTCTCTCCAT
TTCGATTCCG AATACACGCT GAGATACTCT GAAATCTTCG ATTGCCTGCC CGATTTAGAG
CGCCTCAGCC GTTACCATAG CGTACTAAAC GATCTCACAT TTGAACGACG GACTGAGCTG
GCCAGGCTTT TTTTGGATCG CATTGCGAGT TTGCATCGTA TCCGGGTCGC TCACCGGGAT
TTGGATCGGC ATTCCATCTG GATCGATGAG CGACGCAGCA AAGTGGTGCT GTCGAGTTTC
GGGGCCGCTC ATTTTCCAGA ACGAAAGTCC ATCGGGGGCG CCCGTTCAAA GCTGCTGGCG
GGTGGTTATC GAGTCCCGGA GGACGTTGGC GAAAGCCAAA AGGGAACTCC GTTCCAACAG
GATGTGTTCC TTGCAGGAGC GGTTGTATGG AATCTTCTGG TAGGAGCCCG ACTGGAGGAG
ATAGACGGTG TGCCGGTCTG GAGCTCTCGC GACCTTGAGG ACGTTGGCTT ACCCGATGCA
TTTCAGGGAT GGTTTGAGCG TTGTTTAAAG ATCAACGCAA ACGAGCGCTA TGAGAGTGGC
GTCGATGCGG CTGACGCGTT CGCTGAGCTG CTTCGGAAAA CTGAAAAGGC ATCGCTAGAA
CGGCAGTTGG ATGCCTATCG GCGTGATATC GATCCTATAT CAGACTATGA GCCTTCGGAC
TGGATAAGTA AGAAACCTTA TCGCATCTAC AAATCTTTGA AGGATAATGA GAGCCACTTC
GTCAAGAGTT GGCCAGAACG AATTCTCGGT GAGCGCAGAA AATCGGCCGC GCGACTGATC
GAGTTCTTCG GCAAAGCCGA TGCGTTACGA CGGATCGACG CCAAATGGCT TCCGCGAATA
AGCGTTGCGT GTCTTTGCAC CGACGGTCTT CTGCTTATTC AAGATTGGGT TGATGGGGAA
AAGCTATCCG CTTGTGACGT CTCGACCTGG ACACCTGAAG GCTTGCGTCG CTTCGTTGTC
GGGCTGATCG ACGCCGTCGA CGAGCTTCAT AAGCTTGAAC TGAATCACGG CGACATCTCG
CCGGAGAATA TCCTTGTCTG CTTCGATGGG GACATCCCCC GACCTGTACT AGTTGATGTA
GTCGATTTTT CTGCGGATGA CATCGGACGC AGCACCCCTG CTTATTGTCC CGCCGAGGAC
AATGATTTGA GGAGTCGAGA CCGATATGCC GTCGGTCAAA TTGCGTTGGA GCTTGCAGAA
GCCTGCACGG ACGCAGAGAC GGAAGCTCTG CTTCGATTGG GTGCCGGCAA ATGCGCCGAA
GGGGCCGCAC CGTGGCTCAC GCTCAAGGCC CTGAAGGATG CAGTCGTATT TCGCCGAGTG
GCACCAACCA AGATCAAACT CGATATCGAG ATCGAGACTC CCCGCACAAC GTTCGAAGGC
GCAATGCTGT CAGACAATGG CGTATTCCAC ATTGTCAAGT CGAAGAGGGC GCCTGACTCG
ATCGAAGTGT TCGGGTTCGA TCAACGCGTT ACGATCGATT TTGATCCGAA AGATGCCAAG
CCGGTAGAAG CGATCGCGAA CAGAATCGAT ATGGGGCAGG CGGCGTGGGC TCAACGACAC
CGGCTCCTGT CCTTTGAGGG GTCGCTCAAG ATCGTGCGAA GCAGATCAAG GAGATTTGTC
GGACTCGACC ATCTGCCCGA ATTAGTCGCG TCCCATCTCG GTTCAGAGCC TGTAATCGCA
AAGTCGGAGG CTGCGCCGAA GGTCACCGAT GCCCCAGATC CTGCCGCACC GACCACAAAA
CCTGCCACAC AGAAGTTTCC AGTCGAGGAT TTCTGGAACG GGACTATTCT GGCAGAAGAT
GAAATCAGCC CGGAGTTCAC GCTTGCGCAG GAGCCGAGTT ATGACCGCGA TGAAAGGACT
CTGCACCTTA TAGCGGAAGA TAACCTGCCG GAATTTGAGT CCGGAGATGG CCAGTCGATC
AGTATACAAT GGAACGGGTA TAAGCTCGGC GATCTAGATA CGGAGAGATC GCGGGGGACC
ACGGTCGTCG TCCGGAATGT ACGTAACGTG CGCGGGTTGA ATAAAGGGGC AGTGTTAAAG
ATCCCGGACG ACCTTGTCAG CTTCCAGCGG CGGTCTCGGG CAGTGGGTCG CATTCTGGAT
CGAAAATCGC AGATCCCTAA TCTTATTGGA TTTTTCGATC CGGCTGTCGA TCTTGCGCCT
CAGACGTTCG GGCCCGAAAT CGACGACGCG ATCCTATCGC GTTATGGACT GAATCCAGCG
CAAAACGACG CGTTCAAACA TTTGTGGCGT TATGGACCGC TTGGGCTCCT TCAGGGCCCG
CCGGGTACAG GCAAGACGAC GTTCATTGCT GCATTCGTGC ACTATGCGTT GACTGAACTC
CGGCTGAAAA ATGTGCTGGT TCTTTCACAA TCCCACGAAG CTGTTAACGC GGCCTCCGAG
AAAATCCTCC AGACGGCTGC CAAGCACGGC GGCAACATCG AGATGCTGCG CGTGGGGCAG
CACTCGAAGA TTTCGCCGAT CCTCCACAAT TATCACGCCT TCGCGATCCA GGATCGATAC
CGAGAATTGT TTAGAGCTGC GGTGAAGGAG CGTGTTCTCG CTCCGCTAAG TCGGTTGGGT
TTGGAAAGGG ACTACATTTA CGCTGCTGTC GAGATCGAGA ATTCACTCGG CTCGCTACTT
AAGCAGATCG AGTTTTGCGA ACAGGATATT GCGACGTCGC GGGATCAGGA CACCGTTGCG
GCGGCGCATG AACGCCTGGA GGGCCTGAAC CTCGCGTGGG CAGACGCTGT GGAAGAGCAC
GGCGTCTCAC CTGAATTGGA TCCAAGAAGC GCGCTTGAGG AAATCCGGGA TACGTTGGCT
GACCAGTATT CCGTCCATGA CGTCGATGCA CGGCGCAGAC TCCTGCGCGT CCACGGGTTA
GCACTGGAGT GGGGAGCAAC GCTTGGAATG CGAGGGCGGA GTTTGGAAGA GCTCATTGCA
AGGAGCCGCA ATCTGATCAG CGGCACATGT GTGGGTATTG GGCGATACGG TATCCAAGTC
GATCGGAATG TGTACGATCT TGTGATCATC GACGAGGCCG CACGCTGTAC CCCAGGCGAA
CTTGCGGTTG GAATGCAGTC TGGCCGACGA GTAATTCTGG TTGGCGACCA CAAGCAATTG
CCGCCCCTTT ATGGTCATGA GCTGATCGCC GCTCTCGGGG AAAGGCTGAA TATCCGCTCC
AAGAGGGAGC TGAACCGCAG CGACTTCGAA CGAGCTTTCC ATTCAGCCTA CGGGAAGGCT
GTCGCTCGAA CGCTGACAAG CCAGTATCGA ATGGCGCCGA AAATCGGAAA GCTTGTTGCT
GAGACGTTTT ACCCAGGCCA GGAGCTAGAA ACCGAGCGGG GTGGCGCGCC GAAGTATTAC
GAGTATCTGC CGCGGCCGCT CGACGACGAA ATGGTATGGA TTGATACAGG TCACTCGAAA
CATTCCAGAC GAGAGAGAGA GGCCGGAAGC AGTTTCGTCA ATAGGACGGA AGCTGCCGTA
GTCATTTCAC TTCTGAAAGT GATCGCCGGA ACGAAGGGTT TCGTTGATGA GGCGCTCGTC
GATCTTCGGG AAGAGGAGCC GCTCGTTGGC GTGATCTGCA TGTATGCTCC TCAGGTCGGT
ATGATAGAAG AAATGTTGAT TACGTCGGAT TTGTCACCTG ACTTCCAGAA GCTGGTTAAG
GTCGGGACGG TCGATAGTTA CCAAGGCAAG GAGAATCGAA TTGTGATCCT GTCTCTGGTA
AGAAGTAATC CGGAGAGGAA TATGGGTTTC GTGCGCGCGG CTAACCGCAT CAATGTTGCA
CTGTCTCGAG CCATGGAGCG TCTTATCATC GTCGGAAGCA CGGGCATGTT CGAAAGAAAT
GGAAATGCGC TTGCTCCAGT CATTAAGCAC CTCAAAGCAG GCGGGAGAGT GCTTCCAAGT
GCGGGTGTGT TGCAATGA
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| Protein sequence | MEIKFFLPQG PQPTEMAGLE DIRATFPKHW KGYANFVMRQ PQRRGQDREI DIVIVTPDRI
ILVDLKHIRG RIENRGGIWH RDADIIGASP AHKIRDNAKV LASLIRSEIH HFPAVPPVES
LVVLTHPQCD PSGLDQVERD RTLKLSDFLK ITREQNFRNL FTGPTKYSES NSLCSGQCGN
ALQKFFSNGK LFEPRKTRFH GFMPVGDPAF KHPLFEEFSC HQSEDPNYTG LLRLWDFSVD
GEFIVEEARR PIAERERAVL GHIRVQDPAL YENYVLRSLH FDSEYTLRYS EIFDCLPDLE
RLSRYHSVLN DLTFERRTEL ARLFLDRIAS LHRIRVAHRD LDRHSIWIDE RRSKVVLSSF
GAAHFPERKS IGGARSKLLA GGYRVPEDVG ESQKGTPFQQ DVFLAGAVVW NLLVGARLEE
IDGVPVWSSR DLEDVGLPDA FQGWFERCLK INANERYESG VDAADAFAEL LRKTEKASLE
RQLDAYRRDI DPISDYEPSD WISKKPYRIY KSLKDNESHF VKSWPERILG ERRKSAARLI
EFFGKADALR RIDAKWLPRI SVACLCTDGL LLIQDWVDGE KLSACDVSTW TPEGLRRFVV
GLIDAVDELH KLELNHGDIS PENILVCFDG DIPRPVLVDV VDFSADDIGR STPAYCPAED
NDLRSRDRYA VGQIALELAE ACTDAETEAL LRLGAGKCAE GAAPWLTLKA LKDAVVFRRV
APTKIKLDIE IETPRTTFEG AMLSDNGVFH IVKSKRAPDS IEVFGFDQRV TIDFDPKDAK
PVEAIANRID MGQAAWAQRH RLLSFEGSLK IVRSRSRRFV GLDHLPELVA SHLGSEPVIA
KSEAAPKVTD APDPAAPTTK PATQKFPVED FWNGTILAED EISPEFTLAQ EPSYDRDERT
LHLIAEDNLP EFESGDGQSI SIQWNGYKLG DLDTERSRGT TVVVRNVRNV RGLNKGAVLK
IPDDLVSFQR RSRAVGRILD RKSQIPNLIG FFDPAVDLAP QTFGPEIDDA ILSRYGLNPA
QNDAFKHLWR YGPLGLLQGP PGTGKTTFIA AFVHYALTEL RLKNVLVLSQ SHEAVNAASE
KILQTAAKHG GNIEMLRVGQ HSKISPILHN YHAFAIQDRY RELFRAAVKE RVLAPLSRLG
LERDYIYAAV EIENSLGSLL KQIEFCEQDI ATSRDQDTVA AAHERLEGLN LAWADAVEEH
GVSPELDPRS ALEEIRDTLA DQYSVHDVDA RRRLLRVHGL ALEWGATLGM RGRSLEELIA
RSRNLISGTC VGIGRYGIQV DRNVYDLVII DEAARCTPGE LAVGMQSGRR VILVGDHKQL
PPLYGHELIA ALGERLNIRS KRELNRSDFE RAFHSAYGKA VARTLTSQYR MAPKIGKLVA
ETFYPGQELE TERGGAPKYY EYLPRPLDDE MVWIDTGHSK HSRREREAGS SFVNRTEAAV
VISLLKVIAG TKGFVDEALV DLREEEPLVG VICMYAPQVG MIEEMLITSD LSPDFQKLVK
VGTVDSYQGK ENRIVILSLV RSNPERNMGF VRAANRINVA LSRAMERLII VGSTGMFERN
GNALAPVIKH LKAGGRVLPS AGVLQ
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