| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2119 |
|---|
| Symbol | |
|---|
| ID | 4022602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 2370619 |
|---|
| End bp | 2371167 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637962313 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_569255 |
|---|
| Protein GI | 91976596 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00208326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGCTGA CGCATGCCCT CCGCCTAATC GCTTTCGTCT TCGCCGTCGG CGCCATCGCC
GCCGGCACGA CGGCGCACTT CGCGGGGGCG ATCTACGTCA ACGTCCGGCG GCAGATCGAC
CAGATCGCCG CCGATGAGTG CGACAACATG CGGCGCATGG CCGACGAGAT CAGCGAGTTC
GATCCGGAAG CGCGCCGGGA TCCGATGCCG GAGATGTGCG CCAAGCTGCC GAAGCAGGGA
GGTGAGGATG ACAACGATCG ACGAGATCCC AGGGATGCTG CAGAAGAATG GACTCCAGGA
GAAGCTGCTG AGTTCGAGTT GATGCAGCAG GTCTCCTTCG TCCTCGCTGT CGGAGCCGTG
ATTGCCGGCA CGACGGCGCA CTTCGCGGGG GCGATCTACG TCCACGTCCG GCGGCAGATC
GACGCTATCG CCGTCGATGA GTGCGACAAC ATGCGAAAGC TCGCCGACGA GATCCGCGAG
ATCGATCCGG AAGCGCGCCG TAACCCGGTG CCGGAGATGT GCGCCGACAT GGGCAACAGG
AGCGAGTGA
|
|---|
| Protein sequence | MLLTHALRLI AFVFAVGAIA AGTTAHFAGA IYVNVRRQID QIAADECDNM RRMADEISEF
DPEARRDPMP EMCAKLPKQG GEDDNDRRDP RDAAEEWTPG EAAEFELMQQ VSFVLAVGAV
IAGTTAHFAG AIYVHVRRQI DAIAVDECDN MRKLADEIRE IDPEARRNPV PEMCADMGNR
SE
|
|---|
| |