Gene RPD_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2110 
Symbol 
ID4022592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2360828 
End bp2362045 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content69% 
IMG OID637962303 
Producthypothetical protein 
Protein accessionYP_569246 
Protein GI91976587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCAG CGCCGTCGCC GAAATGGGGC CCGGTGGCGC TGGTGGTGCT TCCGACCTTT 
GCGCTCGCCA CCCTGTACGG CTGGGCAGTG CTGGGCTCGA CCGCGTTCAA GCCTGGCTTC
ATCGGCCTGA ACCACATCGC ACTCGGCACC GACTGGGCGG TGTTCTGGGG CGCAATCCGG
GCAATGCTCG ACGGCAACCT GCCGCTGATC ATGGACGGCG ACCGGTTCAC CGCCTTCCTC
AACGACAGTC TGCGCGACTG GCTGACCGTG CCGCTGGCCT ATCGGCCGTG GTTTTACCCA
CCGAGCTTCC TGGTGCTGCT GCTGCCGTTC GCGCCGCTCG GATTCATTGG CTCCTATTTC
GCGTTCCAGA TCGTTACCGC CGCAGCGCTG GTTGCTGCAC TGCTGGTCGG CGCCGACCGG
CCCGATCGTG CGCGCTTCGT CGCACTCGCG GCGCTGCTGT CGCCTGCCGC GGCGATCACC
CTCGCCGACG GCCAATGCTC GTTTTTGGTC GCGGCGCTGA TCGTCGCCGG ATTTCGCGCG
CTGCCGGATC GGCCGCTGCT CGCCGGCGCG GTGCTCGGCC TGCTGAGCTT CAAACCGCAA
TTCGCCGTGC TGATCCCCGT CGCACTCATC GCCGCCGGGC AGTGGCGCGC GCTGCTTGCC
ACGGCCGGCT CAGCGCTGGC GCTGGCCGCG GCGAGCGCGC TGATCTTCGG CCTCGACATC
TGGATCTGGT GGCTGCCGAA GTTGATCGAG AACATGGTCA GCGCCGATCC GAAATGGGTG
AGCTATGGCC GGATCTGGGG CCACAGCGTC TGGGCCTGCG CGAAATTGCT CGGCGCCGGT
GAGACGCTCG CGTCGACGCT GCAAGCCGCG GCCGTGGTCG TTGCCGTGGT GATCACCGCC
CTTTCCTTCC GCATCCGCGG CATGCCGGAT CTGCGGCTCG CGGTCCTGCT GGCCGCGACG
ATCCTCGCCG CGCCGCATTC CGGCCCCTAC GACGCGCTGC TGCTGGTCGT GGCGCTGACG
CTCTGGTTTG CGTCGTTCAC ATCGACGCCC GGACCGTTGC CATGGCTGGT CGCGACTGCG
ATCTGGGTGG TGCCGCTGGC AAGCCCTGCG GTCTACGTCG AAGCTGGCCG GTTCGCACCG
CTCGCCACGC TGGCGATGAT CGGGCTGATT TTCCAAGGGC TGCGCAGGAG CGACGCGTCC
GCGGCCTCCC CCGCCTGA
 
Protein sequence
MSPAPSPKWG PVALVVLPTF ALATLYGWAV LGSTAFKPGF IGLNHIALGT DWAVFWGAIR 
AMLDGNLPLI MDGDRFTAFL NDSLRDWLTV PLAYRPWFYP PSFLVLLLPF APLGFIGSYF
AFQIVTAAAL VAALLVGADR PDRARFVALA ALLSPAAAIT LADGQCSFLV AALIVAGFRA
LPDRPLLAGA VLGLLSFKPQ FAVLIPVALI AAGQWRALLA TAGSALALAA ASALIFGLDI
WIWWLPKLIE NMVSADPKWV SYGRIWGHSV WACAKLLGAG ETLASTLQAA AVVVAVVITA
LSFRIRGMPD LRLAVLLAAT ILAAPHSGPY DALLLVVALT LWFASFTSTP GPLPWLVATA
IWVVPLASPA VYVEAGRFAP LATLAMIGLI FQGLRRSDAS AASPA