Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2106 |
Symbol | |
ID | 4022588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2357218 |
End bp | 2358036 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637962299 |
Product | ABC transporter related |
Protein accession | YP_569242 |
Protein GI | 91976583 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.452782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGGAG AAGCATCGAC GGCAATCGCG CTGCGGGAGG CGAGCGTGGC GTTCCGCCTT GCGGACGGAC GCATCTACAC CGCGGTAGAG AAGGCGTCGC TCGACGTTGC CGACGGCGAG TTTGTAGCGA TCGTCGGACC GACCGGTTGC GGCAAGTCCA CGCTTCTGAA CGTCGCCGCC GGGCTGCTGC GCCCGGTGTC GGGCGAGGCG CGGATATTCG GCGGGCCGCT CGCCGGGCTC AATGCCGATG CCGGCTATCT GTTTCAGGCC GATGCGCTGT TCCCGTGGAA GACCGCGATC GACAATGTCG CGATCGGGCT GGAGATCTCG GGCACGCCGC GCGCCGATGC GCTGGCGCGC GCGCAAGGCT GGCTCGATAC CGTTGGTCTG GGCGCCTTTG CGGGCCGCTA CCCGCACATG CTGTCGGGCG GACAACGCAA GCGGGTCGGG CTCGCGCAAG TGCTGATCCG CGATCCGAAA ATCTTGCTGA TGGACGAGCC GTTCGGCCCG CTCGACGCGC AGACACGACA GATCATGGGC AATCTGTTGC TGCAATTATG GAGCGCGCAT CGCAAGGCGG TGTTGTTCGT CACCCACGAT CTCGAAGAGG CAATCGCGCT TGCCGATCGG GTGGTGATCA TGTCGGCGGG GCCGTCCGCC CACATCATCG GCGACTGGCG CGTGGCGCTG CCGCGGCCGC GTGACATTTT CGAGATTCGC TTGACCCACG AGTTTCATAA GCTGCATCGC GAGATCTGGG GCGTGCTGCG CGATGAGGTG ATGAAGGGCT ACGCTCAGGC CGGGCAGGCG GTGGCGTGA
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Protein sequence | MGGEASTAIA LREASVAFRL ADGRIYTAVE KASLDVADGE FVAIVGPTGC GKSTLLNVAA GLLRPVSGEA RIFGGPLAGL NADAGYLFQA DALFPWKTAI DNVAIGLEIS GTPRADALAR AQGWLDTVGL GAFAGRYPHM LSGGQRKRVG LAQVLIRDPK ILLMDEPFGP LDAQTRQIMG NLLLQLWSAH RKAVLFVTHD LEEAIALADR VVIMSAGPSA HIIGDWRVAL PRPRDIFEIR LTHEFHKLHR EIWGVLRDEV MKGYAQAGQA VA
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