Gene RPD_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2106 
Symbol 
ID4022588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2357218 
End bp2358036 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content66% 
IMG OID637962299 
ProductABC transporter related 
Protein accessionYP_569242 
Protein GI91976583 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.452782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGGAG AAGCATCGAC GGCAATCGCG CTGCGGGAGG CGAGCGTGGC GTTCCGCCTT 
GCGGACGGAC GCATCTACAC CGCGGTAGAG AAGGCGTCGC TCGACGTTGC CGACGGCGAG
TTTGTAGCGA TCGTCGGACC GACCGGTTGC GGCAAGTCCA CGCTTCTGAA CGTCGCCGCC
GGGCTGCTGC GCCCGGTGTC GGGCGAGGCG CGGATATTCG GCGGGCCGCT CGCCGGGCTC
AATGCCGATG CCGGCTATCT GTTTCAGGCC GATGCGCTGT TCCCGTGGAA GACCGCGATC
GACAATGTCG CGATCGGGCT GGAGATCTCG GGCACGCCGC GCGCCGATGC GCTGGCGCGC
GCGCAAGGCT GGCTCGATAC CGTTGGTCTG GGCGCCTTTG CGGGCCGCTA CCCGCACATG
CTGTCGGGCG GACAACGCAA GCGGGTCGGG CTCGCGCAAG TGCTGATCCG CGATCCGAAA
ATCTTGCTGA TGGACGAGCC GTTCGGCCCG CTCGACGCGC AGACACGACA GATCATGGGC
AATCTGTTGC TGCAATTATG GAGCGCGCAT CGCAAGGCGG TGTTGTTCGT CACCCACGAT
CTCGAAGAGG CAATCGCGCT TGCCGATCGG GTGGTGATCA TGTCGGCGGG GCCGTCCGCC
CACATCATCG GCGACTGGCG CGTGGCGCTG CCGCGGCCGC GTGACATTTT CGAGATTCGC
TTGACCCACG AGTTTCATAA GCTGCATCGC GAGATCTGGG GCGTGCTGCG CGATGAGGTG
ATGAAGGGCT ACGCTCAGGC CGGGCAGGCG GTGGCGTGA
 
Protein sequence
MGGEASTAIA LREASVAFRL ADGRIYTAVE KASLDVADGE FVAIVGPTGC GKSTLLNVAA 
GLLRPVSGEA RIFGGPLAGL NADAGYLFQA DALFPWKTAI DNVAIGLEIS GTPRADALAR
AQGWLDTVGL GAFAGRYPHM LSGGQRKRVG LAQVLIRDPK ILLMDEPFGP LDAQTRQIMG
NLLLQLWSAH RKAVLFVTHD LEEAIALADR VVIMSAGPSA HIIGDWRVAL PRPRDIFEIR
LTHEFHKLHR EIWGVLRDEV MKGYAQAGQA VA