Gene RPD_2102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2102 
Symbol 
ID4022584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2352674 
End bp2353693 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID637962295 
Productketol-acid reductoisomerase 
Protein accessionYP_569238 
Protein GI91976579 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0059] Ketol-acid reductoisomerase 
TIGRFAM ID[TIGR00465] ketol-acid reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.668048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTTT ACTACGATCG CGACGCCGAT CTGAACCTGA TCAAGGGCAA GAAGGTCGTC 
ATCGTCGGCT ATGGCAGCCA GGGCCACGCC CATGCGCTGA ACCTGAAGGA TTCCGGCGTC
AAGGACGTCG CGATCGCGCT GCGCAAGGGC TCGGCGACCG CGAAGAAGGC GGAAGCCGCC
GGGTTCAAGG TGATGGAAGT CGCCGAGGCC GCGAAGTGGG CCGACGTGAT GATGATGCTG
ACTCCGGACG AGCTGCAGGG CGAAATCTAT CGCGAGCACC TGCACGACAA CATGAAGCAG
GGCGCGGCGC TGCTGTTCGC CCACGGCCTC AACGTCCACT TCAACCTGAT CGAGCCGCGC
GCCGACCTCG ACGTGCTGAT GGTCGCGCCG AAGGGCCCGG GTCACACCGT GCGTTCGGAA
TATCAGCGCG GCGGCGGCGT GCCCTCGCTG ATCGCGATCC ATAAGGACTC CTCGGGCAAT
GCGCACGACC TCGGCCTGAG CTACGCCTCG GCGATCGGCG GCGGTCGCGC CGGCATCATC
GAGACCTCGT TCAAGGAAGA ATGCGAGACC GACCTGTTCG GCGAGCAGGT CGTGCTGTGC
GGCGGCCTGG TCGAGCTGAT CAAGGCGGGC TTCGAGACGC TGGTGGAAGC CGGCTACGCG
CCGGAGATGG CGTATTTCGA GTGCCTGCAC GAAGTGAAGC TGATCGTCGA CCTGATCTAT
GAAGGCGGCA TCGCCAACAT GAACTACTCG ATCTCCAACA CCGCGGAATA CGGCGAATAC
GTCACCGGCC CGCGCATCGT CACCGCCGAG ACCAAGGCGG AGATGAAGCG GGTTCTGGCC
GACATCCAGA ACGGCATCTT CACCCGCAAC TGGATGCTCG AGAACAAGGT CAACCAGACC
TCGTTCAAGG CCACCCGCGC CAAGCTGGCG CAGCACCCGA TCGAGGAAGT CGGCGCCAAG
CTCCGCGAGA TGATGCCCTG GATCAAGAAG GGCGCGCTGG TCGACAAGAC GAAGAACTGA
 
Protein sequence
MRVYYDRDAD LNLIKGKKVV IVGYGSQGHA HALNLKDSGV KDVAIALRKG SATAKKAEAA 
GFKVMEVAEA AKWADVMMML TPDELQGEIY REHLHDNMKQ GAALLFAHGL NVHFNLIEPR
ADLDVLMVAP KGPGHTVRSE YQRGGGVPSL IAIHKDSSGN AHDLGLSYAS AIGGGRAGII
ETSFKEECET DLFGEQVVLC GGLVELIKAG FETLVEAGYA PEMAYFECLH EVKLIVDLIY
EGGIANMNYS ISNTAEYGEY VTGPRIVTAE TKAEMKRVLA DIQNGIFTRN WMLENKVNQT
SFKATRAKLA QHPIEEVGAK LREMMPWIKK GALVDKTKN