Gene RPD_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2101 
Symbol 
ID4022583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2351898 
End bp2352296 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content63% 
IMG OID637962294 
Productputative AtsE 
Protein accessionYP_569237 
Protein GI91976578 
COG category[N] Cell motility 
COG ID[COG5622] Protein required for attachment to host cells 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.26663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCA TTCCGCATAA CGCACTCATT GTCGTGGCAG ACGGCGGCGG CGCGATCCTG 
CTTCGCAACG CCGGCAAACC CGGCGCCATC AGCTTGCGCG AGGAACGCCG GCTGGAGCCG
AACAACCTCG ACAATGACGG CCCGTCAGGA TCGCGGCCCG GCGACCAGAC CCAGAGCCAA
ACCGACGAGG CCACTTTCGC CAAGCAGCTC AGCAACGCCA TCAACAAGAT GAAGCTTGAC
GGCGAGTTCG AGAAGCTGGT GCTGATCGCG GACCCGCAGA CACTCGGTCA AATGCGTCCG
ATCCTGCACA AGACCGTCGA AGCCTCGCTG ATCCGCTCCC TGGCGAAGGA CCTCACCAAC
CACTCGTTCG ACGACATCGC CGAGGCGATC GCGGTGTAG
 
Protein sequence
MTLIPHNALI VVADGGGAIL LRNAGKPGAI SLREERRLEP NNLDNDGPSG SRPGDQTQSQ 
TDEATFAKQL SNAINKMKLD GEFEKLVLIA DPQTLGQMRP ILHKTVEASL IRSLAKDLTN
HSFDDIAEAI AV