Gene RPD_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2100 
SymbolilvH 
ID4022582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2351346 
End bp2351888 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content64% 
IMG OID637962293 
Productacetolactate synthase 3 regulatory subunit 
Protein accessionYP_569236 
Protein GI91976577 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.337452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGC CTGCATCCGC CTACTTCATG GAAGAGCGCC AAGACCCCAA CGAGACCCAT 
ACGCTGTCGG TGCTGGTGCA GAACGAGCCC GGCGTGCTGG CGCGGGTGAT CGGGCTGTTT
TCGGGGCGCG GCTACAATAT CGAGAGCCTC ACCGTCTCGG AGACCGAGAA TCAGAAGCAC
CTGTCGCGCG TCACCATCGT CACCACCGGC ACGCCGATGG TGATCCAGCA GATCAAGCAT
CAGCTCGATC GCATGGTCCC GGTGTATCGC GTCGTCGACA TGACGCTGAC CGGACGCGCG
ATCGAGCGCG AGCTGGCGAT GGTCAAGCTT CGCGGTACCG GGGACCACCG GGTCGAATCG
CTTCGGCTTG CCGAAGCGTT TCGCGCCCGC GTGATCGACG CGTCGACGGA GAGCTTCGTG
TTCGAGATCA CCGGCAACAC TACCAAGATC AACCAGTTCA TCGAACTGAT GCGCCCGCTA
GGCCTGGTCG AGGTGGTTCG CACCGGCGTC GCCGCGATCG GCCGCGGCGC CGAGGGGATG
TAA
 
Protein sequence
MNQPASAYFM EERQDPNETH TLSVLVQNEP GVLARVIGLF SGRGYNIESL TVSETENQKH 
LSRVTIVTTG TPMVIQQIKH QLDRMVPVYR VVDMTLTGRA IERELAMVKL RGTGDHRVES
LRLAEAFRAR VIDASTESFV FEITGNTTKI NQFIELMRPL GLVEVVRTGV AAIGRGAEGM