Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2100 |
Symbol | ilvH |
ID | 4022582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2351346 |
End bp | 2351888 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637962293 |
Product | acetolactate synthase 3 regulatory subunit |
Protein accession | YP_569236 |
Protein GI | 91976577 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0440] Acetolactate synthase, small (regulatory) subunit |
TIGRFAM ID | [TIGR00119] acetolactate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.337452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAGC CTGCATCCGC CTACTTCATG GAAGAGCGCC AAGACCCCAA CGAGACCCAT ACGCTGTCGG TGCTGGTGCA GAACGAGCCC GGCGTGCTGG CGCGGGTGAT CGGGCTGTTT TCGGGGCGCG GCTACAATAT CGAGAGCCTC ACCGTCTCGG AGACCGAGAA TCAGAAGCAC CTGTCGCGCG TCACCATCGT CACCACCGGC ACGCCGATGG TGATCCAGCA GATCAAGCAT CAGCTCGATC GCATGGTCCC GGTGTATCGC GTCGTCGACA TGACGCTGAC CGGACGCGCG ATCGAGCGCG AGCTGGCGAT GGTCAAGCTT CGCGGTACCG GGGACCACCG GGTCGAATCG CTTCGGCTTG CCGAAGCGTT TCGCGCCCGC GTGATCGACG CGTCGACGGA GAGCTTCGTG TTCGAGATCA CCGGCAACAC TACCAAGATC AACCAGTTCA TCGAACTGAT GCGCCCGCTA GGCCTGGTCG AGGTGGTTCG CACCGGCGTC GCCGCGATCG GCCGCGGCGC CGAGGGGATG TAA
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Protein sequence | MNQPASAYFM EERQDPNETH TLSVLVQNEP GVLARVIGLF SGRGYNIESL TVSETENQKH LSRVTIVTTG TPMVIQQIKH QLDRMVPVYR VVDMTLTGRA IERELAMVKL RGTGDHRVES LRLAEAFRAR VIDASTESFV FEITGNTTKI NQFIELMRPL GLVEVVRTGV AAIGRGAEGM
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