Gene RPD_2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2092 
Symbol 
ID4022574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2342157 
End bp2342666 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID637962285 
ProductMgtC/SapB transporter 
Protein accessionYP_569228 
Protein GI91976569 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTG GCGCCGCCGC GTTCGCCGGC GGGTTGATTG GGCTCAATCG CGATCTCCAG 
GGCAAGCCGA TCGGGATGCG CACGCTGGCG CTGGTCGGCG TGGCCTCGGC GCTGCTGGTC
GCGCTCGCCG ACCAGAGCGC CGACCTTGCC CACGTTTCCG ACGCGACCAG TCGCGTGATC
CAGGGCATCC TCACCGGGAT CGGCTTTCTC GGCGCCGGCG TGATCGTTCA CACCGGCGGC
CATCAGGACG TGCACGGCCT GACCACCGCG GCCTGCACCT GGCTGACAGC CTGTATCGGC
ATCGCCTGCG GCGCCGGCCA ATGGCCGGGC GTCCTGGCCG CAATGGTGAT CACGCTCGCC
GTGCTGACCG GCGGCCACCG GCTGGAGGGC CTGCTACATC GCCTGCTCGG CGGCAAGGAT
TCCGCCAACG GCAAATCTGA GGAGAAGTCG GATCACAAGA CTGAGAAGCA CGACGCCGAA
AACAAGGGGG TTGCCGCGGC GGAAGATTGA
 
Protein sequence
MRLGAAAFAG GLIGLNRDLQ GKPIGMRTLA LVGVASALLV ALADQSADLA HVSDATSRVI 
QGILTGIGFL GAGVIVHTGG HQDVHGLTTA ACTWLTACIG IACGAGQWPG VLAAMVITLA
VLTGGHRLEG LLHRLLGGKD SANGKSEEKS DHKTEKHDAE NKGVAAAED