Gene RPD_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2085 
Symbol 
ID4022567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2336188 
End bp2337120 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content67% 
IMG OID637962278 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_569221 
Protein GI91976562 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.906755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGC ATCTGCTCCG CGCCAAGCTG CGTGCGCAAC GCGCAGCCAA GACCGCGCTC 
GGAAATGTCG CCGGTTCGGC GGCGATCGGC GCGTTGCATC TGGCGCGGAA ATTCGACCCG
ACAAAGACCG CCGACTTCTT CGGCGCCCTG GTGCGCAAGC TCGGTCCGCG ATTGCCCGAG
CAGCGCATCG GCCGCGCCAA TCTCACCGCC GCCTTTCCGG AGAAGTCAGC GGAAGAGATC
GAAGCCATCC TCGCCGGCGT CTGGGACAAT CTCGGCCGCT CCGGCGCGGA GTTCGCGCAT
CTGGATTCGG TCTGGGACTA CGACCCCGAG CATCCGGAGC GCAGCCGGAT CGAAGTGACT
CCACGCTCGC TCGAATTGTT CGAGCAGCTC CGCACCGACG GCAAGCCGGC GCTGATCTTC
GCCAGCCATC TCGGCAATTG GGAGCTGCCC GCCGTCGCCG CCGTCGCGCA CGGGCTCGAC
ACCGCGGTGC TGTATCGCAG GCCGAACATC AAGGCCGCGG ATCGCATCGT CGAGGACATC
CGCTCGGTCA AGATGGGCCA GCTGGTCGCC GCCGGCGGCA CCGCGCCGTT CAAGCTGGCG
CAGGCTCTCC AGGAGGGCAA ACACGTCGGC ATGCTGGTCG ACCAGCATTA CACCAGGGGC
GTCGACGTCA CCTTCTTCGG CCGCACCTGC AAGGCCAACC CGATGCTGGC GCGGCTGCTC
CGCCAGATCG ACTGCCCGCT GCACGGTGCC CGCGTCATCC GCCTGCCCGG CCACCGCTTC
CGCGCCGAAC TCACCGAGGA AATCCCGCCG GTCCGCAATG CGAACGGCGA GATCGATATC
CAGGGCACGA TGCAGGCGGT GACGTCGGTG ATCGAAGGCT GGATTCGCGA GACGCCCGAG
CAGTGGTTGT GGCTGCATCG AAGGTGGCGT TGA
 
Protein sequence
MKLHLLRAKL RAQRAAKTAL GNVAGSAAIG ALHLARKFDP TKTADFFGAL VRKLGPRLPE 
QRIGRANLTA AFPEKSAEEI EAILAGVWDN LGRSGAEFAH LDSVWDYDPE HPERSRIEVT
PRSLELFEQL RTDGKPALIF ASHLGNWELP AVAAVAHGLD TAVLYRRPNI KAADRIVEDI
RSVKMGQLVA AGGTAPFKLA QALQEGKHVG MLVDQHYTRG VDVTFFGRTC KANPMLARLL
RQIDCPLHGA RVIRLPGHRF RAELTEEIPP VRNANGEIDI QGTMQAVTSV IEGWIRETPE
QWLWLHRRWR