Gene RPD_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2081 
Symbol 
ID4022563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2330484 
End bp2331638 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content61% 
IMG OID637962274 
Producthypothetical protein 
Protein accessionYP_569217 
Protein GI91976558 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.292167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGG TCTTCGCCGA TCTGCCCGTC ACCGTTTTCG AGGCGATGTC GCAGCTTGCG 
CGCGACAACA ATGCCATCAA TCTCGGACAA GGGTTCCCGG ACGATCCGGG GCCGGAGGAT
ATCCGTCGCG CTGCCGCGGA CGCGGTGCTC AACGGCTATA ATCAATATCC TTCGATGATG
GGGATCCCCG AGCTGAGGCA GGCGATCGCG ACCCATTACG GGCATTGGCA CGGCGTCAAT
CTGGATCCGA TGACCGAAGT GATGGTCACC TCGGGCGCGA CCGAGGCGCT GGCGAGCGCG
ATCCTGTCGG TGGTCTCGCC GGGCGACGAA GTCATCGTGT TTCAACCGGT CTACGATTCT
TATCTACCGA TCATCCGGCA GGCCGGCGGC ATTCCGCGGT TGGTCCGGCT CGAACCGCCG
CATTGGCGGG TGACCGAGGA AGCATTGCGC GAGGTCTTCA ATCACAAGAC GAAGGCCATC
GTCTTTAACA ACCCGCTCAA TCCCGCAGCG GTGGTCTATC CGCGTGAGGA TCTCGAACTG
CTGGCGCGTT TCTGTCAGGA GTACGACGCC GTCGCGATCT GCGACGAGGT CTGGGAGCAC
GTCACCTTCG ATGGCCTCGG TCATATCCCG CTGATCTCGA TCGAGGGCAT GCGAGAACGC
ACCATCAAGA TCGGCTCGGC AGGCAAGATT TTCTCGCTGA CCGGCTGGAA AGTCGGCTTT
GTCTGCGCCG CGCCGCCGCT GTTGCGGGTA GCGGCCAAGG TGCACCAGTT TCTCGCTTTC
ACGACGGCAC CAAATCTGCA GGTCGCTGTG GCCTACGGCC TCGGTAAGTG CGATGACTAC
TTCCTCGCAA TGCGCAAGGA TCTCGCCCGA AGCCGTGACC GGCTGGCGCA GGGGTTGGCC
AGCATCGGCT TTCCTGTGAT CAAATCGCAG GGTACATACT TTCTCACCGT CGACCTTGCG
CCGCTCGGTC TCAACGAGAC CGATGAGGCA TTCTGCAAGC GGATCGTCAA AGACTACAAG
GTGGCTGCGA TTCCGGTGTC GGCGTTCTAT GAGGAAGAAC CGGTCACTTC GGTGGTACGG
TTTTGTTTCG CCAAAAACGA CCAGACGCTC GACACTGCCC TCGAGCGTCT GTCGGTCGCA
GTGCACGGGC GCTAG
 
Protein sequence
MNRVFADLPV TVFEAMSQLA RDNNAINLGQ GFPDDPGPED IRRAAADAVL NGYNQYPSMM 
GIPELRQAIA THYGHWHGVN LDPMTEVMVT SGATEALASA ILSVVSPGDE VIVFQPVYDS
YLPIIRQAGG IPRLVRLEPP HWRVTEEALR EVFNHKTKAI VFNNPLNPAA VVYPREDLEL
LARFCQEYDA VAICDEVWEH VTFDGLGHIP LISIEGMRER TIKIGSAGKI FSLTGWKVGF
VCAAPPLLRV AAKVHQFLAF TTAPNLQVAV AYGLGKCDDY FLAMRKDLAR SRDRLAQGLA
SIGFPVIKSQ GTYFLTVDLA PLGLNETDEA FCKRIVKDYK VAAIPVSAFY EEEPVTSVVR
FCFAKNDQTL DTALERLSVA VHGR