| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2072 |
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| Symbol | |
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| ID | 4022554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2320213 |
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| End bp | 2322351 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962265 |
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| Product | cytochrome c, class I |
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| Protein accession | YP_569208 |
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| Protein GI | 91976549 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants
[COG3258] Cytochrome c |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.901126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCCCCT CTGCCCCGCC TGACCTCCCC GCCAAAAAAG AAACGACCGG AATCCAAAAA
CTCATGACTG CGAACAAAAG CCAGCTCGTC AAACGCTTCG GAATCGTCGC TGCGGTCGCC
ATCGTTGCGA TCGGCGGCGC GATCGCCTGG GTCGTGCAGC CCCCGCCGAT CGAACGCAAC
GATCCGGGTT TCGGCGCCAC TGTCGATCCC GCACTGGTGG CGCGTGGCGA GTACGTCGCG
CGACTGGGCG ATTGCGTCGC CTGCCACACC ACCGAAGGCG GTCCTGTCAT GGCTGGCGGC
CGGGCGCTGG AGACACCGTT CGGCACGGTG TGGTCGACCA ATGTGACGCC GGATTCGAAA
ACCGGGATCG GGCAATGGTC GTTCGGCGCG TTCGACCGCG CGATGCGCAA AGGCGTGGCC
GCTGACGGTC ACAACCTGTA TCCGGCGATG CCCTACCCGT CCTACGCGAA GATGACGGAC
GAGGACATGA AGGCGCTCTG GGCCTATCTG ACCAAGGGCG TCGCGCCGGT CGAGAAAGCA
AATCGCGCAG CCGAGATGCG GTTTCCATTC AACATGCGCG TCGGCCTCGC CGCCTGGAAT
GTCGCCTTCC TGGACGCGAC GCCTTTCAAA CCCGATCCGG CGAAGGACGC CGTGTGGAAT
CGCGGCGCCT ATCTGGTCCA GGGTCTTGGC CATTGCGGCG CCTGTCACAC GCCGCGCGGC
ATCGCTTTCC AGGAGAAAGC GATGAGCGAC GCCGGTCCGG ACGGGCGCTT CTATCTTGCC
GGCGCGAAGG TCGAGAACTG GAATGCTGTA GAATTGCGCG ATCTGTGGAC CGTCAAGGAC
ACCGTCGAGC TGCTGAAGAC CGGACAGAAC CGCTTCGCCA CCGCTTCCGG CAGCATGACC
GAAGTCATCC TGCATTCGAC GCAGTACCTC GCCGATGACG ATCTGACGGC GATCGCAACC
TATCTCAAGG CGCTGCCCTC CGACCGTCCC AAGGCCGAGC CGCGGATCGT CTCGACCGAA
GCGCCTGCGA ACACCTTCAC CAGCCGCGGC GGCCTCGGCT ACGCACAATT CTGCACCGAC
TGCCACCGCC CCGACGGCGC AGGTGTAAGA GGCGTATTCC CGCCGCTCGC GGGCAATCCG
ACGGTCACCG CGAAAGACCC TGCGACGCTG GTGCATATCG CGCTGACTGG CTGGAAGACC
ACCGCGACCA CCACCCACCC GCGGGTCTGG ACGATGCCGG CCTTCGCCCG CCTCGCCGAT
CGCGAGATCG CCGAAATCCT GTCCTTCGTG CGCGAGAGCT GGGGCGAAGG CGCCGGGCCG
GTCAGCACCG CCCAAGTGGC GGCAGCGCGC GCCGAGCTTG ATCCGAAAAT CGACAAGTCG
CTGTTCGAAA CTCCGCGCAT CGCCGATCTG TTGTCGCAGC CGAACGCCAC CCAACTGGTT
CGTGGCATGC GGCTCAACGC GGAGACGCGC GCGCTGCTGC CGAACCATGT CGGCGACGAT
CTCAACTGCG CCTCGTGCCA CCTCAACGCC GGAACGGTTG CGGACGGCAG CCCCTATGTC
GGCGTCTCGG CGTTCTTTCC CAGCTACGCA CCGCGCGCCG GTCGCGAGAT CACGCTGGAG
GACCGCATCA ACGGTTGCTT CCTGCGCTCG ATGAACGGCA AGCCGCTGCC GGTCGACGGC
GCCGATATGA AGGCGATGGT GGCCTATTTC GACTGGATGA AGGGCGCGAC CAAGCCCGAA
GACAAGGTGG CGGGACGCGG CGTCGGCAAG GTCGACACCA GCCTGAAGCC CAATCCCGAG
AACGGCAAGA CGATCTACGC GGCGCAATGC GCTGTCTGCC ACGGCCAGAA CGGCGAAGGC
CTGAAGGACG CCGCGGGACG CCTGGTCTAT CCGCCGCTGT GGGGCGAACG TTCGTTCAAC
ATCGGGGCCG GCATGGCCCG CACCTTCACC GCCGCGGCCT TCGTCAAGCG CAACATGCCG
ATCGGCACGC ACGAGAAGTT TCCGCTCGGG CAAGGCGGCC TGACCGATCA GGAGGCGATC
GACGTCGCGG AGTATTTCAC CCACATGGAG CGGCCGGACT TCGCCGGCAA GGCGAAGGAC
TGGCCGAAGG ATCCAAAGCC GAAGGACGCG CGCTACTGA
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| Protein sequence | MLPSAPPDLP AKKETTGIQK LMTANKSQLV KRFGIVAAVA IVAIGGAIAW VVQPPPIERN
DPGFGATVDP ALVARGEYVA RLGDCVACHT TEGGPVMAGG RALETPFGTV WSTNVTPDSK
TGIGQWSFGA FDRAMRKGVA ADGHNLYPAM PYPSYAKMTD EDMKALWAYL TKGVAPVEKA
NRAAEMRFPF NMRVGLAAWN VAFLDATPFK PDPAKDAVWN RGAYLVQGLG HCGACHTPRG
IAFQEKAMSD AGPDGRFYLA GAKVENWNAV ELRDLWTVKD TVELLKTGQN RFATASGSMT
EVILHSTQYL ADDDLTAIAT YLKALPSDRP KAEPRIVSTE APANTFTSRG GLGYAQFCTD
CHRPDGAGVR GVFPPLAGNP TVTAKDPATL VHIALTGWKT TATTTHPRVW TMPAFARLAD
REIAEILSFV RESWGEGAGP VSTAQVAAAR AELDPKIDKS LFETPRIADL LSQPNATQLV
RGMRLNAETR ALLPNHVGDD LNCASCHLNA GTVADGSPYV GVSAFFPSYA PRAGREITLE
DRINGCFLRS MNGKPLPVDG ADMKAMVAYF DWMKGATKPE DKVAGRGVGK VDTSLKPNPE
NGKTIYAAQC AVCHGQNGEG LKDAAGRLVY PPLWGERSFN IGAGMARTFT AAAFVKRNMP
IGTHEKFPLG QGGLTDQEAI DVAEYFTHME RPDFAGKAKD WPKDPKPKDA RY
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