| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2069 |
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| Symbol | |
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| ID | 4022551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2315425 |
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| End bp | 2317023 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637962262 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_569205 |
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| Protein GI | 91976546 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.285589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.580851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGGG AACGTTTGTA TCTCTACGAC ACCACGTTGC GCGACGGCGC GCAGACCAAC
GGCGTCGATT TCACGCTGCA CGACAAGCGG CTGATCGCGG GGCTGCTCGA CGACCTCGGC
ATCGATTATG TCGAAGGCGG CTATCCCGGC GCCAATCCGC TCGACACCGA GTTCTTCGCC
ACCGAGCAGA AGCTCGAGCG CGCGACCTTC GCGGCGTTCG GCATGACGCG GCGGCCGGGC
CGCTCGGCCT CGAACGATCC CGGCGTCGCG CTGCTGCTCG ACGCCAAGGC GGATGCGATC
TGCTATGTCG CGAAATCGTC GGAGTATCAG GTCCGCGTCG CGCTCGAAAC CACCAACGAA
GAGAACATCG CCTCGATCCG TGACAGCGTC GCGATCGCCA AGGACAGAAG CCGCGAAGTT
CTGGTCGATT GCGAGCACTT CTTCGATGGC TACAAGGAGA ACCCGGCGTT CGCGCTGGAC
TGCGCCAAGG CGGCCTATGA GTCCGGCGCT CGCTGGGTGG TGTTGTGCGA TACCAATGGC
GGCACCATGC CCGACGAGGT CGAGGCGATC GTCGGCGAGG TGGTGAAACA CATCCCCGGC
AGCCATGTCG GCATCCACGC CCACAACGAC ACCGAACAGG CCGTGGCCGT GTCGTTCGCC
GCGGTGCGCG CCGGCGCACG ACAGATCCAG GGCACGCTGA ACGGGCTCGG CGAGCGTTGT
GGTAACGCCA ATCTGGTGTC GATGATCCCG ACGTTGAAGC TGAAGAAGGA ATTCGCCGAC
CGATTCGAGA TCGGCGTCTC CGACGACAAG CTGGCGACGC TGGTGCAGGT GTCGCGCGCG
CTCGACAATA TTCTCGACCG CGCACCCAAT CCGCACGCGC CCTATGTCGG CGGCAGCGCC
TTTGTCACGA AAACGGGGAT CCATGCCTCG GCGGTGATGA AGGACCCGCA CACCTACGAG
CACGTCACGC CGGAATCGGT CGGAAATCAT CGCAAGGTGC TGGTATCGGA TCAGGCCGGC
CGCTCCAACG TGGTGGCGGA ATTGTCGCGT ACTACGATCG AGTTCGACCG CAACGATCCG
AAGCTCGGCC GCCTGATCGA GAAGATGAAG GAGCGCGAGG CGGCCGGATA CGCCTACGAA
TCCGCCAACG CTTCGTTCGA TCTCCTGGCG CGCGGCACGC TCGGCAAGGT GCCGGAATTC
TTCCGCGTCG AGCAGTTCGA CGTCAATGTC GAGCAGCGCT ACAACTCGCA CGGCGAACGC
GTTACCGTGG CGATGGCGGT GGTCAAGGTC GAGGTCGACG GCGAGACGCT GATCTCGGCC
GCGGAAGGCA ACGGCCCGGT CAATGCGCTC GACGTCGCCT TGCGCAAGGA TCTCGGCAAG
TATCAGAAGT ACATCGAGAA CCTGAAGCTG ATCGACTATC GCGTCCGTAT CCTCAATGGC
GGCACTGAAG CGGTGACGCG CGTGCTGATC GAGAGCGAGG ACGAACTCGG CGAGCGCTGG
ACCACGATCG GCGTATCGCC GAATATCATC GACGCCTCGT TCCAGGCGCT GATGGATTCG
GTGGTCTACA AGCTGGTGAA GTCGAACGCG CCGGCGTGA
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| Protein sequence | MSRERLYLYD TTLRDGAQTN GVDFTLHDKR LIAGLLDDLG IDYVEGGYPG ANPLDTEFFA
TEQKLERATF AAFGMTRRPG RSASNDPGVA LLLDAKADAI CYVAKSSEYQ VRVALETTNE
ENIASIRDSV AIAKDRSREV LVDCEHFFDG YKENPAFALD CAKAAYESGA RWVVLCDTNG
GTMPDEVEAI VGEVVKHIPG SHVGIHAHND TEQAVAVSFA AVRAGARQIQ GTLNGLGERC
GNANLVSMIP TLKLKKEFAD RFEIGVSDDK LATLVQVSRA LDNILDRAPN PHAPYVGGSA
FVTKTGIHAS AVMKDPHTYE HVTPESVGNH RKVLVSDQAG RSNVVAELSR TTIEFDRNDP
KLGRLIEKMK EREAAGYAYE SANASFDLLA RGTLGKVPEF FRVEQFDVNV EQRYNSHGER
VTVAMAVVKV EVDGETLISA AEGNGPVNAL DVALRKDLGK YQKYIENLKL IDYRVRILNG
GTEAVTRVLI ESEDELGERW TTIGVSPNII DASFQALMDS VVYKLVKSNA PA
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