| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2058 |
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| Symbol | |
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| ID | 4022540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2306602 |
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| End bp | 2307990 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962251 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_569194 |
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| Protein GI | 91976535 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.210314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC GTTGGACACC CGATAGCTGG CGCAGCAAGC CGGTTCAGCA GATGCCGGAT
TACCCGGACG CGAAGGCGTT GGGCGATGTC GAGGCGCAGC TGTCGACCTT TCCGCCGCTG
GTTTTTGCAG GTGAGGCGCG CAACCTGAAG AAGGCGCTGG CGAGCGTGGC GGCTGGCGAA
TCTTTCCTGC TTCAGGGCGG CGATTGCGCC GAGAGCTTTG CCGAGCACGG CGCCAACAAC
ATCCGCGACC TGTTCCGCGT CTTCTTGCAG ATGGCGATCG TGCTGACCTA TGCGGGCGCC
TCGCCCGTGG TGAAGGTCGG CCGCATCGCC GGTCAGTTCG CCAAGCCGCG CTCGGCGCCA
GTCGAGAAGC GCGACGGCGT CGAACTGCCG AGCTACCGCG GCGACATCGT CAACGACATC
GCCTTCACCG AGGACGCGCG CCGGCCTGAT CCGCGCCGCC AGCTCGAGGC TTATCGCCAG
TCCGCCGCGA CGCTCAACCT GCTGCGCGCC TTCGCCAAGG GCGGCTACGC CAGCGTGGAG
AACGTTCACC GCTGGATGCT GCAGTCGGTC AGCGACAGTC CGCAGTCGAA GGCCTATGCG
GATCTTGCCG ACCGGGTCTC CGGCGCGCTC GATTTCATGC GCGCCTGCGG CCTGACCTTC
GCGGTCGACA GCGCGCTCGG CACCACCGAT TTCTACACCA GCCACGAAGC GCTGCTGCTC
GGCTACGAGC AGGCGATGAC CCGGATCGAT TCGACAACCG GCGACTGGTA CGCGACCTCC
GGCCACATGA TCTGGATCGG CGATCGCACC CGTCAGCTCG ATCACGCCCA TATCGAGTAT
TTCCGCGGCA TCAAGAATCC GATCGGCCTG AAATGCGGTC CGTCGCTGAA GACCGATGAG
CTGCTGAAGC TGATCGACGT GCTCAATCCC GAGAACGAGG CGGGCCGGCT GACGCTGATC
GGCCGGTTCG GCGCCGACAA GATTGGCGAC AGCCTTCCGG CGATGATCCG CACCGTACAG
CGCGAGGGCC GCAAGGTGGT GTGGTCGTGC GATCCGATGC ACGGCAACAC CATCACCTCG
ACCTCGGGCT ACAAGACCCG GCCGTTCGAC CGCATTTTGT CGGAAGTTCG CTCGTTCTTC
ACGATCCACG CCGCAGAGGG CACCCATGCC GGCGGCGTGC ATCTGGAGAT GACCGGGCAG
AACGTCACCG AATGCATCGG CGGCGCGCGC GCGATCACCG ACGAGGACCT CAACAACCGC
TATCACACCG CCTGCGATCC GCGGCTCAAT GCCGAGCAGT CGATCGACAT GGCGTTCCTG
ATTGCGGATC TGCTGAAGCA GGGCCGCGAC GGCAAGGTGA GCCCGCTGCC GGTCGCCGCG
GGACTGTGA
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| Protein sequence | MSERWTPDSW RSKPVQQMPD YPDAKALGDV EAQLSTFPPL VFAGEARNLK KALASVAAGE
SFLLQGGDCA ESFAEHGANN IRDLFRVFLQ MAIVLTYAGA SPVVKVGRIA GQFAKPRSAP
VEKRDGVELP SYRGDIVNDI AFTEDARRPD PRRQLEAYRQ SAATLNLLRA FAKGGYASVE
NVHRWMLQSV SDSPQSKAYA DLADRVSGAL DFMRACGLTF AVDSALGTTD FYTSHEALLL
GYEQAMTRID STTGDWYATS GHMIWIGDRT RQLDHAHIEY FRGIKNPIGL KCGPSLKTDE
LLKLIDVLNP ENEAGRLTLI GRFGADKIGD SLPAMIRTVQ REGRKVVWSC DPMHGNTITS
TSGYKTRPFD RILSEVRSFF TIHAAEGTHA GGVHLEMTGQ NVTECIGGAR AITDEDLNNR
YHTACDPRLN AEQSIDMAFL IADLLKQGRD GKVSPLPVAA GL
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