Gene RPD_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2056 
Symbol 
ID4022538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2304493 
End bp2305002 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content62% 
IMG OID637962249 
Producthypothetical protein 
Protein accessionYP_569192 
Protein GI91976533 
COG category[S] Function unknown 
COG ID[COG3184] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.203866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTC TATCGAACGC TTTGCTGGCC ACTGGGCTGG CACTGGGAAT CGCATTGTCC 
GCGGGACATG CGATGGCGCA GGCCAAACCG CCGACGCCGG CGGCGGTTGC GGCGGCCAAG
GAAATCCTGG AGCTGAAGCG CGCCAACACG ATCTATGCCA ACGCCGTGCC CGGCATCGTC
CAGCGCACAA TGGACACCTT GATGCAGACC AATCTGAACT ATCAGCAGGA CCTCAAGGAA
GTCGCCTCGG TCGTCGCCAA GAACCTGGCG GGACGTGAGA AGGAAATCGG CGACGGCATG
GCGAAGATCT ACGCCCAGGA CTTCACCGAA CAGGAGCTGA AGGATTTGGT GGCGTTCTAC
AAGACGCCGC TCGGCCAGAA GCTGCTGAAC GAGGAGCCGA AGGCGATCGC CGCCAGCATG
CAGTACATGA ACCAGTGGGC GCAGACCTTC TCCGAGGAGG TCAACGGCCA GTTCCGCGCC
GAGATGCGCA AGCGCGGCAA GGCGATCTGA
 
Protein sequence
MKLLSNALLA TGLALGIALS AGHAMAQAKP PTPAAVAAAK EILELKRANT IYANAVPGIV 
QRTMDTLMQT NLNYQQDLKE VASVVAKNLA GREKEIGDGM AKIYAQDFTE QELKDLVAFY
KTPLGQKLLN EEPKAIAASM QYMNQWAQTF SEEVNGQFRA EMRKRGKAI