| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2054 |
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| Symbol | |
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| ID | 4022536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2302947 |
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| End bp | 2303624 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962247 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_569190 |
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| Protein GI | 91976531 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.203866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAT CCCGCACCGT TGTTTTCGAC CTGGACGGCA CGCTGATCGA TACGGCGCCC
GACCTGATCA ACGCCCTGAA CTACATCCTC GTCCGCGAAG GTATGCCCGC GGTCCCGTTT
GCGTCTGCGC GCAATATGAT CGGGCAAGGC GCGCGGCGAT TGCTGGAGCG CGGCCTCGAG
CTTGATGGCC GCGTCATCAG CCCGGACGAC GTCAACCGGC TCGCCGTCGA CTTCATCGAC
TATTACGCGG CCAACATCGC CGTCGAGTCG CGGCCGTTCG AGGGGCTCGA AGCCACGCTG
GATGAGCTCG CTGGCCAAGG CTACCGTTTT GCGGTTTGCA CCAACAAGCT GGAATGGCTG
TCGAAGCTGC TGCTCGACCA GCTCGGCCTA AGCTCGCGCT TCGCCGCGAT CTGCGGCGCG
GACACCTTCG GCGTCGCCAA GCCCGATCCA GCGATTCTGC GCGAGACCGT GGCCAAAGCA
GGCGGCGATC TGTCGTCGGC GGTGATGGTC GGCGACGCCG GACCGGACGT CGGCGTGGCG
CGGCGGGCCG GCATCCCGGT GATCGGCGTC GAGTTCGGCT ACACCGAAGT TCCCATCGCG
GAACTCAATC CGGACCTGTT GGTCGGCCAT ATGCGGGACC TCCCCGGCGC AGTCGCGCGC
CTGCTGCCGC CGGCATGA
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| Protein sequence | MSTSRTVVFD LDGTLIDTAP DLINALNYIL VREGMPAVPF ASARNMIGQG ARRLLERGLE
LDGRVISPDD VNRLAVDFID YYAANIAVES RPFEGLEATL DELAGQGYRF AVCTNKLEWL
SKLLLDQLGL SSRFAAICGA DTFGVAKPDP AILRETVAKA GGDLSSAVMV GDAGPDVGVA
RRAGIPVIGV EFGYTEVPIA ELNPDLLVGH MRDLPGAVAR LLPPA
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