Gene RPD_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2053 
Symbol 
ID4022535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2302322 
End bp2302783 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content69% 
IMG OID637962246 
Producthypothetical protein 
Protein accessionYP_569189 
Protein GI91976530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.201224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTT TCGTTGTCAT TGCCGCGACA GGCTTGAGCC TCGCCGGCTG TTCGTCGTTG 
TCGTTTGACG CCTTCAAATC GGCGCCGCCG ACTGTCACGG TGCAGCTCGA CTCGGTGCCG
CCCGGCGCCG AGGCGCTCAC GTCCGGTGGC CAGAGCTGCA AGACGCCCTG CTCGATCACC
GCGCCGGCGG CCGACTTCAG CGTGACCTTC TCCCAGAACA AGTTCCAGCC TGCGACCGTG
CCGGTGCAGG TCGTCGTGAA CCCGGGCGAT TTCACCACCT CCGCCACCGC GACGGCCACA
CCGAACCCGG TGGTGGCCGA ACTGCAGCCG GCGACGCCGG TGCGCAAGCG CAAGCCGGTG
GTCAAGCGCG TGAAGAAGCC GAAGCCGGCA GCCGCCGCAA CCACTGCCCC CGAGGAATCG
TCTCCGTTCC CTGCCCCGGC TGCAGCCGCG CCGGCACGCT GA
 
Protein sequence
MRRFVVIAAT GLSLAGCSSL SFDAFKSAPP TVTVQLDSVP PGAEALTSGG QSCKTPCSIT 
APAADFSVTF SQNKFQPATV PVQVVVNPGD FTTSATATAT PNPVVAELQP ATPVRKRKPV
VKRVKKPKPA AAATTAPEES SPFPAPAAAA PAR