| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2047 |
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| Symbol | |
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| ID | 4022529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2294807 |
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| End bp | 2296000 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962240 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_569183 |
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| Protein GI | 91976524 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.996651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.228122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCT CCTCCGCCGA TCCGCGCCAG ACCGAACATA TGGGGTGGTT GGGTTCAAGG
ACAGAATTCA ACTCTCACCC GCCCTCGCCA TCGTTACGGC TGGTCTTACA GCAGCGGATG
ATCTCGGCGA AACGGTCTTT TGCACTGCAA GAGATACGGC CCCAGCAATT CGATCGAAGA
CAATTGCCCC CGTCAGCCCC TTGCCCGTCG AGCCTCGCGG CCTATGCTGA CTCACCTGCC
GCGGGCCTGC ATCAGGCTAC GCTGACTGCC TCAACTCGAT TCGGCCGGCA TTCGATCGGG
CCGCGCAATC TGAAGGGTAC AGACATGGCC AAAGTCGCTT TCCTCGGTCT CGGCGTGATG
GGTTTTCCGA TGGCCGGACA TCTCGTCAAA AAGGGAGGGC ACGACGTCAC CGTCTATAAT
CGTACCGCCG CAAAAGCAAA GAGCTGGGCC GATCAGTTTG GAGGCCGCAC GGCGGCGACG
CCGGCTGAAG CGGCCAAGGA TCAGGACTTC GTGATGGCCT GCGTCGGCAA CGACCACGAC
TTGCGGGCAG TGACCACAGG CGACGACGGC GCGTTCGCGG CGATGAAATC CGGCGCGATC
TTCGTCGATC ACACCACCGC GTCCGCCGAG GTCGCGCGCG AGCTGGATGC GGCCGCGACC
AAGGCCGGCT TCGCCTTCAT TGATGCGCCG GTGTCGGGCG GCCAGGCCGG CGCCGAGAAC
GGCGTCCTGA CGGTGATGTG CGGCGGCAGC GACGGGGCCT ATGCCAAGGC CGAGCCGGTG
ATCGCGTCCT ATGCGCGGAT GTGCAAGCTG CTCGGACCGG CCGGCTCCGG CCAGCTCACC
AAGATGGTCA ATCAGATCTG CATCGCCGGG CTGGTCCAGG GGCTGTCGGA AGGCATCCAC
TTCGCCAAGA AGGCGGGCCT CGACGTCAAC GCCGTGATCG ACACCATCTC CAAGGGCGCC
GCGCAGTCCT GGCAGATGGA GAACCGGCAC AAGACGATGA ACGACGGCAA ATACGATTTC
GGCTTCGCGG TCGAATGGAT GCGCAAGGAC CTGTCGATCT GCCTGGCCGA GTCCCGCCGC
AACGGCGCCA GCCTGCCGGT GACCGCGCTG GTGGATGCCT TCTACGCCGA AGTCGAAAAG
ATCGGCGGAC GCCGTTGGGA CACCTCCAGC CTGCTGGCAC GGCTCGAACG CTGA
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| Protein sequence | MDFSSADPRQ TEHMGWLGSR TEFNSHPPSP SLRLVLQQRM ISAKRSFALQ EIRPQQFDRR
QLPPSAPCPS SLAAYADSPA AGLHQATLTA STRFGRHSIG PRNLKGTDMA KVAFLGLGVM
GFPMAGHLVK KGGHDVTVYN RTAAKAKSWA DQFGGRTAAT PAEAAKDQDF VMACVGNDHD
LRAVTTGDDG AFAAMKSGAI FVDHTTASAE VARELDAAAT KAGFAFIDAP VSGGQAGAEN
GVLTVMCGGS DGAYAKAEPV IASYARMCKL LGPAGSGQLT KMVNQICIAG LVQGLSEGIH
FAKKAGLDVN AVIDTISKGA AQSWQMENRH KTMNDGKYDF GFAVEWMRKD LSICLAESRR
NGASLPVTAL VDAFYAEVEK IGGRRWDTSS LLARLER
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