| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2039 |
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| Symbol | |
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| ID | 4022521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2285822 |
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| End bp | 2288878 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637962232 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_569175 |
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| Protein GI | 91976516 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0940765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTCTT TCAACCTCTC CGACTGGGCT CTGCAACATC GTTCGCTGGT CTGGTACTTC
ATGATCGCGT TCATGTTCGC CGGGCTGTTC TCCTACCTCG AGCTCGGACG CGAAGAAGAC
CCTGCCTTCA CCATCAAGAC CATGGTGATC CAGGCCAAGT GGCCTGGCGC CTCGGCTGAA
GAAACCACGC GACAGGTCAC CGACCGGATC GAGAAGAAGC TCGAGGAACT GGAGTCGCTG
GACTACACCA AGAGCATCAC CACGCCGGGG CAGACGACGG TGTTCGTCAA TCTGCGCGAC
ACCACCAAGG CGCGCGACGT CACGCCCACC TGGGTCCGCG TCCGCAATAT GATCAACGAC
ATCAAGGGTG ACTTTCCGGA GGGCGTGATC GGACCGGGTT TCAACGACCG CTTCGGTGAC
GTGTTCGGCA ATATCTACGC CTTCACCAGC GACGGCCTGA CCCAGCGGCA GTTGCGAGAC
AAGGTCGAGG AAGTCCGCGC CCAGGTCCTG CAGGTGCCCA ATGTCGGCCG CGTCGACATC
GTCGGCGCGC AGGACGAGGT GATTTTTCTC GAGTTCTCGA CCCGCAAAGT CGCGGCCCTT
GGTCTCGACC AGCGTTCGAT CCTGACATCG CTCCAGGCGC AGAATGCGAT CACTCCGTCC
GGTGTGCTGC AAGCCGGGCC GGAGCGGATC AGCGTGCGGG TCAGTGGGCA GTTCACCTCG
GAGGAGAGCC TCAAAGCGAT CAATTTGCGC GTCAATGATC GGTTCTTTCC GCTCACCGAC
GTCGCCACCA TCCGCCGCGG CTATTCCGAT CCGCCGACGT CGCTGTTCAG GTTCAAGGGT
GAGCCTGCGA TCGGCTTGAC GATCGGCATG AAGGCTGGCG CCAATCTGCT CGAATTCGGC
CAAGCACTGA AAAAGGAGAT GACGCGGATC TCAGCCGACC TGCCGGTCGG CGCCGAAGTT
CATCTGGTAT CCGATCAGCC GCAGATCGTC GACGACGCAG TTTCGGGCTT CACCCGGGCT
CTATTCGAAG CGGTCGTCAT CGTGCTGGCG ATCAGTTTCA TCAGCCTCGG AATGCGTGCC
GGCCTCGTTG TCGCGATCTC GATTCCACTG GTGCTGGCGA TCACCTTCAT GGTGATGTCC
TATTCCGGAA TCTCGTTGCA GCGGATTTCG CTGGGGGCGC TGATCATCGC TCTCGGCCTT
CTGGTCGATG ACGCAATGAT TGCGGTCGAA ATGATGGTGG CCCGGCTCGA GGTCGGCGAC
ACGCTCGCCA AGGCCGCAAC CTACGTCTAC ACCTCGACTG CCTTTCCGAT GCTGACAGGC
ACGCTGGTGA CGGTCGCGGG CTTCATCCCG ATCGGCCTCA ACAGCAGCGC GGCGGGCGAA
TTCACCTTCA CGCTGTTCGT CGTGATCGCG GTGTCGCTGC TGACATCGTG GATCGTCGCG
GTGCTGTTCA CGCCGCTGCT CGGCGTCACC ATCCTGCCGG ACAAGATGAA GAGCCACCAC
GAGAACAAGG GCTGGTTTTC CACCCGCTTC AGTCGCGTGC TGATTTTTTG CATGCGGCGG
CGCTGGTTGA CGATCACGGT GACGCTGGCA GCGTTCGCGC TGTCGATCGT CGGGATGCGG
TTCGTCCAGC AGCAGTTCTT CCCATCTTCC GATCGCAAGG AACTCATCGT CGACTGGAAT
CTCCCCAAGA ACAGCTCGAT TGCCGAGACC AGCGCGCAGA TGGCGCAGTT CGAGCGCGAG
GCGTTGCAGG GTAAGGACGG CATCGATCAC TGGTCGACCT ATGTCGGTCA GGGGGCGCCG
CGTTTCGTGT TGTCGTTCGA TGTTCAACCC GCGGATTTCT CGTTTGGGCA GATGGTGATC
GTGACCAGAA GCCTGGCTGA CCGGGACCGG CTGAGGGGCG AGTTGCAGGG CTATCTGAAG
AAGACGTTCC CCGGGACCGA CGCGCTGGTG AATCTGCTCG ACATCGGCCC GCCAGTCGGG
CGGCCGGTCC AGTATCGTCT CAGCGGCCCG GACATTGCAA AAGTACGTGC CCTGTCGCGC
GAGCTCGCTG GCATCGTTGC CGGCAACCTG CATCTCGGCG ACGTGGTGTT CGACTGGATG
GAGCCCGCGC GGGTCGTCAA GGTCGACGTG CTGCAAGACA AGGCGCGGCA GCTCGGCGTG
ACCTCTGAAG ACATCGCGTC TACGCTCAAC AGCATCGTCG ACGGCGTATC TATCACTCAA
GTTCGCGACG ACATCTATCT GGTCAAGGTG CTGGGCCGCG CCAACGCTGC AGAGCGCGGT
TCGATTGAAA CGCTGCGCAA TCTGCAATTG TCGGGCAGCA GCGGGCAGTC TGTTCCGCTC
GCGGCGGTGG CGACGTTCCG CTACGAGCTC GAGCAGCCGA CGATCTGGCG GCGGTCGCGT
CTGCCGACGA TCACCATCAA GGCAAGCATT CGGGATGGCG TTCAGCCGGC GACTGTCGTC
CAGCAGCTGA AGACGCCAAT CGCCGAATTT TCCTCGAAGC TGCCGGTCGG CTATTCCGTC
GCGGTCGGCG GCAGCGTCGA GCAGAGTGGA AAGTCCCAGG CGCCGATCGC CGCGGTCGTG
CCGATCATGC TGTTCGCGAT GGCGACCATC CTGATGGTGC AGCTGCAGAG CTTCAGCCGG
CTGTTTCTGG TGTTCGCCGT CGCACCGCTG GCTTTGATCG GCGTCGTCGC GGCATTGTTG
CCGAGCGGGG CGCCGCTCGG CTTCGTCGCA ATCCTCGGCG TGCTGGCGCT GATCGGAATT
CTGATCCGCA ATTCGGTCAT TCTGATCGTG CAGATCGAAC ATTTGCGCAG TGAGGGTAAG
CCGCCATGGG AAGCGGTGGT CGAGGCGACC GAACATCGTA TGCGACCGAT CCTGTTGACC
GCCGCCGCGG CCAGCCTGGC GCTGATCCCG ATCGCGCGCG AGGTGTTCTG GGGGCCGATG
GCCTACGCGA TGATGGGTGG CATCATCGTC GGAACGGTTC TGACGCTGCT GTTCCTGCCC
GCGCTCTACG TCGCGTGGTT CCGTATCAAG ATGCCCGAAG AAGGCGCGCC TGCATGA
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| Protein sequence | MKSFNLSDWA LQHRSLVWYF MIAFMFAGLF SYLELGREED PAFTIKTMVI QAKWPGASAE
ETTRQVTDRI EKKLEELESL DYTKSITTPG QTTVFVNLRD TTKARDVTPT WVRVRNMIND
IKGDFPEGVI GPGFNDRFGD VFGNIYAFTS DGLTQRQLRD KVEEVRAQVL QVPNVGRVDI
VGAQDEVIFL EFSTRKVAAL GLDQRSILTS LQAQNAITPS GVLQAGPERI SVRVSGQFTS
EESLKAINLR VNDRFFPLTD VATIRRGYSD PPTSLFRFKG EPAIGLTIGM KAGANLLEFG
QALKKEMTRI SADLPVGAEV HLVSDQPQIV DDAVSGFTRA LFEAVVIVLA ISFISLGMRA
GLVVAISIPL VLAITFMVMS YSGISLQRIS LGALIIALGL LVDDAMIAVE MMVARLEVGD
TLAKAATYVY TSTAFPMLTG TLVTVAGFIP IGLNSSAAGE FTFTLFVVIA VSLLTSWIVA
VLFTPLLGVT ILPDKMKSHH ENKGWFSTRF SRVLIFCMRR RWLTITVTLA AFALSIVGMR
FVQQQFFPSS DRKELIVDWN LPKNSSIAET SAQMAQFERE ALQGKDGIDH WSTYVGQGAP
RFVLSFDVQP ADFSFGQMVI VTRSLADRDR LRGELQGYLK KTFPGTDALV NLLDIGPPVG
RPVQYRLSGP DIAKVRALSR ELAGIVAGNL HLGDVVFDWM EPARVVKVDV LQDKARQLGV
TSEDIASTLN SIVDGVSITQ VRDDIYLVKV LGRANAAERG SIETLRNLQL SGSSGQSVPL
AAVATFRYEL EQPTIWRRSR LPTITIKASI RDGVQPATVV QQLKTPIAEF SSKLPVGYSV
AVGGSVEQSG KSQAPIAAVV PIMLFAMATI LMVQLQSFSR LFLVFAVAPL ALIGVVAALL
PSGAPLGFVA ILGVLALIGI LIRNSVILIV QIEHLRSEGK PPWEAVVEAT EHRMRPILLT
AAAASLALIP IAREVFWGPM AYAMMGGIIV GTVLTLLFLP ALYVAWFRIK MPEEGAPA
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