| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2037 |
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| Symbol | |
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| ID | 4022519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2283664 |
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| End bp | 2284755 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962230 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_569173 |
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| Protein GI | 91976514 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.323562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAT CCCTCATGCT CCCTTCGCTC CGGAACGTCC TTTGGCTGCC TGTTTGCGTG
GTGCTGGCGG GCTGCAGTGA AGAGGCTCCC CAGAATCGGC CGGCGGCCTT GGTCAAGACC
GAGCTCGTGC GGTTGCAGCC CCGGCAGACC GTCATTCGTC TGACCGGCGA CGTTCAGGCG
CGCGTCAGCA CTGAATTGTC ATTCCGGGTG AGTGGGCGGG TGATCGAGCG CCTTGTGGAT
GTCGGCGCCC ATGTGAAGGC CGGCGACGTG CTGGCGAGGA TCGATCCGAC CGAGCAACGC
GCCGACCTTG TCGGCGCGCA GGCGGCAGTG GCGGCTGCGG AGGCTCAATT GCGTCTCGCC
AAGGCGACCT TCGAGCGGCA GAAGTCGCTG ATGGCCAGCG GCTTCACCAC CCGGGTGGCA
TTCGATCAGG CGCAAGAGGG GTTGCGGACC GCGGAAGGAT CGCTCGACAC GGCCAAGGCG
CAGTTGGGCA TCGCCACCGA TGCGCTGAGC TATACCGAGC TTCGGGCCAG CGCTGCGGGG
ATCATCACTG CGCGCAACAT CGAGGTCGGT CAGGTCGCGC AATCCGCCCA GTCTGCTTAC
ACGCTCGCCG AGGATAACGC CCGTGACGCC GTGTTCGACG TCAACGAGTC GATCTTCCTG
ACGCCGCTCG AGGGCAGCAC CGTCAAGCTG ACAATGGTGT CGGACCCGTC GATCAGCGCG
ATCGCGCGTC CGCGCGAGAT TTCTCCCACG GTTGACCAGA AGAGTGGGGC GGTCCGGGTC
AAGCTTTCGA TCGAAAATCC GCCGGCGGCA ATGACGCTCG GCAGCATCGT GACCGGCGAG
GGGCGCGGCA GGCCGGTCGA CAAGATCGTG CTGCCCTGGA GTGCCCTGAA CGCCAATCTC
ACTGGGCCGG CCGTCTGGGT CGTCGATCCA AAAACCCGCG CGGTGGCGCT CAAGAATGTC
GTGATCGAGA GCTACGAAAC CAATTCGATC GTGGTCGGCG GCGGTCTCAC CGCCGGCGAG
CGGGTCGTCG TCGACGGCGG CAAGCTGCTC CGGCCGGCAC AAATCGTCAC CTATGACGGG
GAAAACTCAT GA
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| Protein sequence | MSRSLMLPSL RNVLWLPVCV VLAGCSEEAP QNRPAALVKT ELVRLQPRQT VIRLTGDVQA
RVSTELSFRV SGRVIERLVD VGAHVKAGDV LARIDPTEQR ADLVGAQAAV AAAEAQLRLA
KATFERQKSL MASGFTTRVA FDQAQEGLRT AEGSLDTAKA QLGIATDALS YTELRASAAG
IITARNIEVG QVAQSAQSAY TLAEDNARDA VFDVNESIFL TPLEGSTVKL TMVSDPSISA
IARPREISPT VDQKSGAVRV KLSIENPPAA MTLGSIVTGE GRGRPVDKIV LPWSALNANL
TGPAVWVVDP KTRAVALKNV VIESYETNSI VVGGGLTAGE RVVVDGGKLL RPAQIVTYDG
ENS
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