| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2033 |
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| Symbol | |
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| ID | 4022515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2278432 |
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| End bp | 2279619 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962226 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
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| Protein accession | YP_569169 |
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| Protein GI | 91976510 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.455844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTT CGATCGATCG CCCGACGAGC GCGGTTGATC CAGCCGATGG CGTCGCGGTG
TTGGAAACCC GCGGCTCGGT CGCGGAGAGC TTCGGCATTC CGCTCGCGGT GCTGCTGGAA
TTGACGCATC GCTGCCCGCT GCAGTGCCCG TATTGCTCGA ACCCGGTGGA GCTGGAGCGC
GGCGGAGCGG AGCTGTCGAC CGACGAATGG AAGCGGGTGT TGAGTGAACT CGCCGCGATC
GGCGTGCTGC AGATTCATTT TTCCGGCGGC GAGCCGACCG CGCGAAAAGA TCTCGACGAG
CTGGTGCGGC ACGCCAGCGA GGTCGGGCTG TACACCAATT TGATCACGTC GGCGGTGCTG
TTGACGCGCG TGCGCCTTGC GGCGCTGGCC GACGCCGGGC TGTGCCACGT CCAGATCAGC
TTTCAAGGCA ACGAGCCGGC CGTCGCCGAT CGCGTCGCGG GTTTCGCCAG CGCTCATGCG
AAGAAAATCG AAGTCGCGCG CTGGACCCGC GAGCTCGATC TGCCGCTCAC CGTCAATGCC
GTGATGCATC GGCAGAACCT TCATCAACTG CCCGACATCA TCGAGATGGC GGTCGCGCTC
GACGCCGACC GGCTCGAAGT CGCCAATGTT CAATATTACG GCTGGGCGCT GAAGAACCGC
GCTGCGCTGA TGCCGACGCT GCAGCAGATC GAGGGCTGCA CGGCGATCGT GGAGACCGCG
CGCGAAAGGC TGAAGGGCGT GCTGGCGATC GACTACGTCA TCCCGGACTA CTACGCGCTG
CGGCCGAAGA AGTGCATGGG CGGCTGGGGC CGGCAGTTCT TCAACATCTC GCCGAGCGGC
AGGGTGCTGC CGTGCCACGC CGCCGAGACC ATCACCGGAC TCGTCTTCGA CTCGGTGCGG
GACGGCAAGT CGATTGCGGA GATCTGGCGC AGCTCCGAAG CGTTCAACCG CTATCGCGGC
ACCGGCTGGA TGCAGGAGCC GTGTGCAAGC TGCGCCTTCA AGGACATCGA TTTCGGCGGC
TGCCGCTGTC AGGCGTTTGC GCTCACCGGC GATGCTGCGG CGACCGATCC GGCCTGCGCA
TTGTCGCCGT TGCACGAGCG CATCTTCAAG ACCGCGGAGG CGGAAGCGGC GCAGGGCAGC
GACCGCTTCC TGTATCGCAA TTTCGCCGGC GGGACGGCGG AGGCGTGA
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| Protein sequence | MSASIDRPTS AVDPADGVAV LETRGSVAES FGIPLAVLLE LTHRCPLQCP YCSNPVELER
GGAELSTDEW KRVLSELAAI GVLQIHFSGG EPTARKDLDE LVRHASEVGL YTNLITSAVL
LTRVRLAALA DAGLCHVQIS FQGNEPAVAD RVAGFASAHA KKIEVARWTR ELDLPLTVNA
VMHRQNLHQL PDIIEMAVAL DADRLEVANV QYYGWALKNR AALMPTLQQI EGCTAIVETA
RERLKGVLAI DYVIPDYYAL RPKKCMGGWG RQFFNISPSG RVLPCHAAET ITGLVFDSVR
DGKSIAEIWR SSEAFNRYRG TGWMQEPCAS CAFKDIDFGG CRCQAFALTG DAAATDPACA
LSPLHERIFK TAEAEAAQGS DRFLYRNFAG GTAEA
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