Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2030 |
Symbol | |
ID | 4022512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2276430 |
End bp | 2277356 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962223 |
Product | pyrroloquinoline quinone biosynthesis protein PqqB |
Protein accession | YP_569166 |
Protein GI | 91976507 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.455844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCGCG TCGTCGTTCT TGGAGCGGCG GCCGGCGGCG GCGTGCCGCA ATGGAATTGC GGCTGCTCCG TTTGTCGCGC CGCGTTTGCC GATCGTGACC TTCGACGCAC GCAGGCGTCG ATGGCGGTCA GCGCGGATGG CGATCACTGG TTCCTGATCA ACGCGTCGCC CGATCTGCGC CAGCAGGTGA TCGCGACGCC GCAGCTCCAT CCAAAGCCGG GCGCGCTGCG CCATTCGCCG ATTGCGGGTG TGATCCTGAC CAATGGCGAG GTCGATGCGG TCGCGGGGCT GCTGTCGATG CGCGAAGGAT CCCCGTTCGC GATCTACGCT CACGCCAAGG TGCTGGCGAT CCTGAAGGCC AACAGCATCT TCAATGTGCT GAACGAGAAG CTGGTGTCGC GTCGGCCGAT CGAGACCGAT CAGCGGTTCG AGCCGACGCT GCCGGACGGA ACCCTGTCGG GTCTCGACGT CGTTGCTTTC TCGGTTCCCG GAAAGGGCGC CTGGTATCTC GAAGGGCAGG CGCACCCGGG CGGCGACGCT GCCGATGGCG ATACCCTCGG CTTGACGATC ACCGACAAGG CGACAGGCCA ATCCATCCAC GTGCTCACAG CCTGTGCGCG CGTGACCGAT GATCTGAAAG CGCGGCTCGC CGGTGCGCCG CTGGTGTTGT TCGACGGAAC GGTGTGGCGC GACGACGAAT TGATCACCGC CGGGCTCGGC CACAAGACCG GGCAGGCGAT GGGCCACATC GCGATGTCGG GCGACGAGGG TGCGATTGCC GCGCTCGGCG ACCTCGACAT TGCGCGAAAA CTATTCGTGC ATATCAATAA CTCCAACCCT GTACTGCTGA GCTGCTCCGC CGAGCGCGAA GCCGCCGAGC GAGCCGGTTG GCAAGTCCCT GCGGATGGGA CGGAGGTGAC GCTGTGA
|
Protein sequence | MMRVVVLGAA AGGGVPQWNC GCSVCRAAFA DRDLRRTQAS MAVSADGDHW FLINASPDLR QQVIATPQLH PKPGALRHSP IAGVILTNGE VDAVAGLLSM REGSPFAIYA HAKVLAILKA NSIFNVLNEK LVSRRPIETD QRFEPTLPDG TLSGLDVVAF SVPGKGAWYL EGQAHPGGDA ADGDTLGLTI TDKATGQSIH VLTACARVTD DLKARLAGAP LVLFDGTVWR DDELITAGLG HKTGQAMGHI AMSGDEGAIA ALGDLDIARK LFVHINNSNP VLLSCSAERE AAERAGWQVP ADGTEVTL
|
| |