Gene RPD_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2023 
Symbol 
ID4022505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2269138 
End bp2270112 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID637962216 
Product2-dehydropantoate 2-reductase 
Protein accessionYP_569159 
Protein GI91976500 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1893] Ketopantoate reductase 
TIGRFAM ID[TIGR00745] 2-dehydropantoate 2-reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.607439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.396245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCT GTATCTACGG CGCCGGCGCG ATCGGCGGAT ATCTCGGCGT GCAACTCGCG 
CAATCCGGCG CCGACGTCAG CCTGGTGGCG CGCGGCGCGC ATCTTGCGGC GATGAAGGAG
AACGGTCTCA AGCTGCTGAT CGGCGACGAG GAGCGCGTGG TGAAAGTCCG CGCCACCGAC
ACCCCGTCCG AACTCGGCGT GCAGGACTTC ATCATCATCT GCCTCAAGGC GCATTCGATC
ACCGGCGCGA TCGACGCGAT GAAGCCGCTG CTCGGCTCGC ACACCCGCAT CGTCACCGCC
GTCAACGGCG TGCCGTATTG GTACTTCTAC AAGCACGGCA ATCAGTTCGA GGGCTCGACG
CTGGAGAGCA TCGATCCCGG TGGCCGGCAG TGGAAGGAGC TCGGCCCCGA GCGCGGCATC
GGCTGCATCG TCTATCCCGC CACCGAGCTC GAAGCGCCCG GCGTGATCCG CCACGTCTAT
GGCGACAAAT TCCCGGTCGG CGAAGCCTCC GGCGAGACCA CCGCCGACGT GCAGAATCTG
TCCAAGCTGC TGGAGGCCGC CGGCCTGAAG GCGCCGATCC TCGACCGGAT CCGCGACGAG
ATCTGGCTGA AGCTGTGGGG CAATGTCTGC TTCAACCCGA TCAGCGCCCT CACCCACGCC
ACGCTCGACG TGATCGCGTC CGATCCCGCG ACGCGCGCGC TGTCGAAGGC GATGATGCTG
GAAGCGCAGG CAATCGCCGA GACCTTCGGC GTCACGTTCC GCGTCGACGT CGAGCGGCGG
ATCGAGGGCG CGCGAAAAGT CGGCGCGCAC AAGACCTCGA TGCTGCAGGA CCTCGAGCGC
GGCCGCCCGA TGGAGATCGA TCCGCTGGTC ACCGTGGTGC AGGAGATGGG CCGCATGACC
AATATCCCGA CCCCGGCGAT CGACGCCGTG CTCGGCCTGG TGATCCAGCG CGCCAAGGTA
GCGGGGCTGT ACTAA
 
Protein sequence
MKVCIYGAGA IGGYLGVQLA QSGADVSLVA RGAHLAAMKE NGLKLLIGDE ERVVKVRATD 
TPSELGVQDF IIICLKAHSI TGAIDAMKPL LGSHTRIVTA VNGVPYWYFY KHGNQFEGST
LESIDPGGRQ WKELGPERGI GCIVYPATEL EAPGVIRHVY GDKFPVGEAS GETTADVQNL
SKLLEAAGLK APILDRIRDE IWLKLWGNVC FNPISALTHA TLDVIASDPA TRALSKAMML
EAQAIAETFG VTFRVDVERR IEGARKVGAH KTSMLQDLER GRPMEIDPLV TVVQEMGRMT
NIPTPAIDAV LGLVIQRAKV AGLY