Gene RPD_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2014 
Symbol 
ID4022496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2253475 
End bp2256444 
Gene Length2970 bp 
Protein Length989 aa 
Translation table11 
GC content67% 
IMG OID637962207 
Productbifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 
Protein accessionYP_569150 
Protein GI91976491 
COG category[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG1391] Glutamine synthetase adenylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.551573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTT CCGCGATCGA CGCGGACATT CCTCCCTCCG CACTGGCCGC ACGCTTTGCC 
GCCGGACCGC AGCTCCATGC CCCGGAAGAG GCGGAAAAGC GCCTGGCCGA CTGGCTCGGC
GATGTTCCGG CGGACCTCGC CGGCGCGATC CGCTCTGTCG CCGATCGCCA TCCGCATGTC
GGCGTTGCGT TGCGGTCGAT CGCCGAAGCC TCGCCCTATC TGTTCGACCT GATCCGCGCC
GACCCGGCGC GGCTGCTCGG CCTGCTGCGC TCCGATCCGG AAGCCGGCTT CGTGGCGTTG
CTGGACCGCG CCTCGGCTGC GGTCGCCGCC GCCTCCGACG AGGCCGAGGT GATGGCGGTG
CTCCGCAAGA TGAAGGCGGA GGCAGCGCTG TCGATCGCGC TGTGCGACAT CGGCGGGCTG
TGGCCGGTGA TGCAGGTGAC GCAGGCGCTG ACCGACCTCG CGGTGAATTC GGTGCAGATG
ACGCTGCGCT TTCTGCTGCG GCAGGAGGCG GCGCGCGGCC GCATCATTCC TCCGAACAGC
GACGCGCCGG AACAGGGCAG CGGCCTCGTC GTGCTGGCGA TGGGGAAGAT GGGGGCGGGC
GAGCTCAACT ACTCCAGCGA TATCGATCTG ATCGTGTTTT ACGATCTCGA CGCGCCGACG
CTGGCGCCCG ACATCGAGCC TCAGCCGTTC TTCGTGCGGG TGACGCAAGG TCTCAGCCGC
ATCCTGCAGC AGCGCCGGCA CGACGGCTAC GTGTTCCGCG TCGATCTGCG GCTTCGCCCC
GATCCGGCCT CGACGCCGGT GGCGCTGTCG ACGGTGTCGG CGCTGAATTA CTATGAGCGC
GAGGGCCGCA CCTGGGAGCG CGCCGCCATG ATCAAGGCGC GCGCCTGCGC CGGCGATCTG
GTCGCCGGGG AAGCGCTGCT CGGCGACATC GCGCCGTTCG TCTGGCGCAA ACATCTCGAC
TTCGCCGCGT TGTCCGATGT CCATGACATG AAGCGGCAGA TGCAGACTTT CCGCGGCCAG
ACCGAGGTCG CTGTCGAGGG CCACAACGTC AAGGTCGGCC GCGGCGGCAT TCGCGAGATC
GAGTTCTTCG CGCAGACTCA GCAATTGATC GCCGGCGGCC GGCATCCGGA ATTGCGGGTG
CGGCCGACGC TCGCCGCGCT CGATATCCTC GCCGCGCGCG ACTGGATCAC CTATCAGGCG
CGTGACGAGC TGTCGGTGGC TTATCAGTTC CTGCGCCGCG TCGAGCATCG CATCCAGATG
ATCGCCGACG AGCAGACCCA CACGCTGCCG GACAGCGTCG AGGCGGTGGA GCGGTTCTCC
CGATTCTTCG GCTATGAAAG CAGGGAGGCG TTCGCGCGCG ACCTGCTGGC GTATTTCGAC
TGCGTGCAGG GCCATTACGG CAAGCTGTTC GAGGGCGACC CGACCGGCAC CGTCAAGCTG
CCGATCGACT ACGCCGGAGG CCCCGACGAC ACGGGGCTGC TCGATCATCT GCATGGTCTC
GGCTACAAGA AACCGCTGAT GGTCGCGACC ACGCTGCAGC AATGGATGAC CGGCGGCTAT
CGCATCCTGA AGGTCGAGAC GACGCAGCGC GCATTCCACG AATTCGTGCC GATGCTGATC
GAGGAACTGG CGCGCGCCGA AGAGCCCGAC AATGCGGTGA ACGCGTTCGA CCGTTTGCTG
CAGGCGCTAC ATCGCGGCGG CCGGCTGATT TCGCTGCTGA GCCAGAACCG CGATCTGCTG
ACGCTTGTCG CGCTGGTGCT CGGCGCGGCG CCGCGGCTCG GCGACATGCT GGCGCGGCAG
CCGCAGATCC TGGACGGGCT GATCGATCCG CGCTTCTTCG GCGCGATGCC CGACCGCGCC
GAACTGTCCG CGCGGCTCGC GGCGACGCTT GCCGACGCCG GCCCCTATGA GGAATTCCTC
GACCGGCTGC GGCTGTTCGG TCAGGAGAGC CTGTTCCTGA TCGGCACGCG GATTCTCTCC
GGCACGGTAT CGACCCAGCA GGCCAGCGTC GCCTTCGCCG ACGTCGCCGA AGGCATCGTC
GGCACCGTTC ATGATCTCGT CAGCGAGCAG TTCATCTCGC AATACGGCCG GATCAAGGAT
CAGCAAACAG CGATCCTGGC GATGGGCAAG CTCGGCAGTC GCGAGATGAC GGCGTCGTCC
GATCTCGATC TGATCCTGAT CTACGATTTC GATCACGAGC AGCCGGACAG CGACGGCGAA
CGCTCGCTGC AAGGCGCGCA GTATTTCGCC CGCTTCACCC AGCGGCTGAT CTCGGCTTTC
ACCACGCGCA CCAATTACGG TGTGCTGTAC GACGTCGACA TGCGGTTGCG TCCCTCGGGA
CGCGCCGGCC CGCTGGCGTC GCGGCTGGAC TCGTTTGCGG AGTACCAGGA GGTCGAGGCC
TGGACCTGGG AGCATCTGGC GCTCACCCGG GCGCGGGTGA TCTCTGCGTC GCCTGAATTC
CGTGAGCGGA TCGAACAAGT GATCCGCGCC GTGCTGACGC GGCCGCGTGA CGCCGCGATC
ATCGCCAATG ACGTCGCCGA AATGCGCCAC GCGATCGCGC AGGAGAAGGG CGAGGACGAC
GTCTGGGATA TGAAATACGC CGCCGGCGGC ATGGTCGATA TCGACTTCAT CGCCCAGTAT
CTGCAACTCG TGCACGCCGC CGCGACGCCG GAGATCCTCG GCGTCAGCAC GCTGGGGGCG
ATCGACAATG CGGCCAGGCT CGGTGTGCTG GCGCAGTCCG ATGCGGAAGT GCTGCGCCCC
GCGGCGCGGC TGTATCACGA CCTCACGCAG ATCTTGCGGC TGTGCGTCAG CGACAAGTTC
AAGCCCGAGA CGGCCGGCGA GGATTTGCTG CGGGTGTTGG TGCGCGCCGG CGATGCGCCG
GATTTCTCCT CGCTGGAAGC GCGCGTGAAG GAAACCCAGG CCGAGGTCCG GGCGATCTTC
AACCGGCTGA TCGGCGGCGA CAGCGCGTAA
 
Protein sequence
MNSSAIDADI PPSALAARFA AGPQLHAPEE AEKRLADWLG DVPADLAGAI RSVADRHPHV 
GVALRSIAEA SPYLFDLIRA DPARLLGLLR SDPEAGFVAL LDRASAAVAA ASDEAEVMAV
LRKMKAEAAL SIALCDIGGL WPVMQVTQAL TDLAVNSVQM TLRFLLRQEA ARGRIIPPNS
DAPEQGSGLV VLAMGKMGAG ELNYSSDIDL IVFYDLDAPT LAPDIEPQPF FVRVTQGLSR
ILQQRRHDGY VFRVDLRLRP DPASTPVALS TVSALNYYER EGRTWERAAM IKARACAGDL
VAGEALLGDI APFVWRKHLD FAALSDVHDM KRQMQTFRGQ TEVAVEGHNV KVGRGGIREI
EFFAQTQQLI AGGRHPELRV RPTLAALDIL AARDWITYQA RDELSVAYQF LRRVEHRIQM
IADEQTHTLP DSVEAVERFS RFFGYESREA FARDLLAYFD CVQGHYGKLF EGDPTGTVKL
PIDYAGGPDD TGLLDHLHGL GYKKPLMVAT TLQQWMTGGY RILKVETTQR AFHEFVPMLI
EELARAEEPD NAVNAFDRLL QALHRGGRLI SLLSQNRDLL TLVALVLGAA PRLGDMLARQ
PQILDGLIDP RFFGAMPDRA ELSARLAATL ADAGPYEEFL DRLRLFGQES LFLIGTRILS
GTVSTQQASV AFADVAEGIV GTVHDLVSEQ FISQYGRIKD QQTAILAMGK LGSREMTASS
DLDLILIYDF DHEQPDSDGE RSLQGAQYFA RFTQRLISAF TTRTNYGVLY DVDMRLRPSG
RAGPLASRLD SFAEYQEVEA WTWEHLALTR ARVISASPEF RERIEQVIRA VLTRPRDAAI
IANDVAEMRH AIAQEKGEDD VWDMKYAAGG MVDIDFIAQY LQLVHAAATP EILGVSTLGA
IDNAARLGVL AQSDAEVLRP AARLYHDLTQ ILRLCVSDKF KPETAGEDLL RVLVRAGDAP
DFSSLEARVK ETQAEVRAIF NRLIGGDSA