| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2013 |
|---|
| Symbol | |
|---|
| ID | 4022495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2252006 |
|---|
| End bp | 2253478 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637962206 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_569149 |
|---|
| Protein GI | 91976490 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.327957 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.42057 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCAT TCGGTAAGCT GATCCGAACC ACCGCGTTTC GGTTGACGCT GGTCTATCTG
TTTCTGTTCG GGCTGTTCGC GGCGTCGCTG CTGGGGTACT TCGCCTGGAA CACCCGCCGG
CTGATCACCG ATCAGATCAC CACCACGGTG AACGCCGAGA TCGGCGAGAT CGACGAGATC
TATACGCGGC GCGGGCTGCG CGGGCTGGTG TACACCATCG AGAGCCGCGC GCTGCGGCCC
GGCGCCAATC TCTATCTCGT CACCACGCCG GCAGGGCAGG CGGTCGCCGG CAATGTCGGC
TCGCTGGCGC CCGGCGTGAT GAGCAAGATC GGCTGGACCG AAACCTTCTA TCGCCGGCTC
GACGATCAGG ATCGCGCCCA GCATCGGGCC CTGGTTCGCG TCAGCGAATT GTCGAGCGGC
TTCCGGCTGC TGGTCGGTCG CGATCTGGAG GAACGCCGGC GGCTGTTCAA TGTGGTGCGC
TCGGCGGCGC AATGGTCGGT GCTCATCGTT GTCGTGCTGG GCCTGGGCGG CGGCATCTTC
GTCGCCCGCC GCGTGTTGCG ACGGATCGAC GCGATGACCG GCACCACGCA GCGGATCATG
GCCGGCGATC TCTCCGGCCG GCTGCCGGTC GGGCGCAGCG GCGACGAACT CGACCGCCTC
GCGGAAAATC TCAACGCGAT GCTGGAGCGG ATCGAGGCGC TGATGAACGG CCTCAAGGAG
GTCTCCGACA ACATCGCCCA CGATCTGAAG ACGCCGCTGA CACGGCTGCG CAATCGCGCC
GAGGAGGCGC TGGCGCAGTC CGGCGGCGAG GCCGACTACC GCGCCGCGCT GGAGCGCACC
ATCGAGGAAT CCGATGGACT TATCCGCACC TTCAATGCGC TGCTGATGAT CGCCCGTGCG
GAATCCGGGC ATTCGCGCGG CGACATGGAT ACGTTCGACG CCGCCGACAC CGCGCGCGAC
ATCCACGAGC TGTACGAGCC GCTGGCGGAA GACAACGGCC TGACGCTGCA GGTCAGGAGC
GAACCGGCGC CGGTTCGTGG CAATCGCGAT TTGATCAGCC AGGCGCTCGC CAATCTGGTC
GAGAACGCCA TCAAATATGG TCAGCCGCAG CTCGCGCTGG CGGCGCCGGG CGCCGAGCCG
AACGCGGCCG CGCCGCCGGA TGCGACCGTG ATCCTGATCG AGGCGCGGCG TGACGGCGAT
CAGGTGCTGC TCAGCGTCAC CGATCATGGC CGCGGAATAC CGGAAACCGA TCGCAAACAC
GCGGTCGAGC GTTTCGTGCG GCTCGAGGCC AGCCGCACCC AGCCGGGCTC CGGGCTCGGT
CTCAGCCTTG CCTCTGCGGT GGCGACGCTG CATGGCGGTG AATTGCGGCT GTCGGACGCC
CAACCGGGTT TGCGCGCCAC GCTTGCAATT CCGGCGCACA CGGGCGAAGG ACTGGCTTCG
GCCAACACAA CACCAGAACC GACGCCAGCA TGA
|
|---|
| Protein sequence | MTAFGKLIRT TAFRLTLVYL FLFGLFAASL LGYFAWNTRR LITDQITTTV NAEIGEIDEI
YTRRGLRGLV YTIESRALRP GANLYLVTTP AGQAVAGNVG SLAPGVMSKI GWTETFYRRL
DDQDRAQHRA LVRVSELSSG FRLLVGRDLE ERRRLFNVVR SAAQWSVLIV VVLGLGGGIF
VARRVLRRID AMTGTTQRIM AGDLSGRLPV GRSGDELDRL AENLNAMLER IEALMNGLKE
VSDNIAHDLK TPLTRLRNRA EEALAQSGGE ADYRAALERT IEESDGLIRT FNALLMIARA
ESGHSRGDMD TFDAADTARD IHELYEPLAE DNGLTLQVRS EPAPVRGNRD LISQALANLV
ENAIKYGQPQ LALAAPGAEP NAAAPPDATV ILIEARRDGD QVLLSVTDHG RGIPETDRKH
AVERFVRLEA SRTQPGSGLG LSLASAVATL HGGELRLSDA QPGLRATLAI PAHTGEGLAS
ANTTPEPTPA
|
|---|
| |