Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2007 |
Symbol | |
ID | 4022489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2246081 |
End bp | 2246731 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637962200 |
Product | hypothetical protein |
Protein accession | YP_569143 |
Protein GI | 91976484 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.746968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.868254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGACGT CGCGACACCT CATCGTCACT ACGATGCTTC TCGGTCTCGC AGTCGGCTCC GCGAGCGCCG GCGATGCGGA GCGGAAACTG ACTTTCCCGC AAGGCGCGAC CGCCACAAAG GTGGCCGGCA AGATCTCGGG GCGGAACGGC GTCAATCACC TCGTCGCGGC CGGAGCCGGA CAAACCATGC AGGTGCTCTT CGCGCCGTCG AATCGATCCT GCTACTTCAA CGTTTTCGAG CCGGGCGCCG CTGAAGCGGC TCATATCGGA TCAACCGCCG GCAATGAGTT CGGCGTTGAG CGAACGACAG CGGGCACTTA CCGGGTGCAG GTCTACCTGA TGCGCAATGC GGCGCGACGC AACGAGGTCT GCCGCTATCA GCTCTCGGTC GAACTCACCG GCGCACCGGG CGGTGTCTCC GCAGGCGTCT CCGACCGTAT CAAGCAGGAT GTCTGCAAGG CCGAGGCGGC CGGCATGTAT GGCGTCGACC AGCGACGGAT CGCTGTCGGC CCGGTCCGGA CCTCCCCCCG TGGCTCAGAA ATCGACGGGA CCGCCGACAA ACAGGCAGAC GGAATCAAGA AGCTGCGCTG CATCTTCAAG GCGGACGGCA GCTTCGACCA CATCATGGCC ATGACCCCGG ACGGAGAATA A
|
Protein sequence | MLTSRHLIVT TMLLGLAVGS ASAGDAERKL TFPQGATATK VAGKISGRNG VNHLVAAGAG QTMQVLFAPS NRSCYFNVFE PGAAEAAHIG STAGNEFGVE RTTAGTYRVQ VYLMRNAARR NEVCRYQLSV ELTGAPGGVS AGVSDRIKQD VCKAEAAGMY GVDQRRIAVG PVRTSPRGSE IDGTADKQAD GIKKLRCIFK ADGSFDHIMA MTPDGE
|
| |