Gene RPD_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2007 
Symbol 
ID4022489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2246081 
End bp2246731 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID637962200 
Producthypothetical protein 
Protein accessionYP_569143 
Protein GI91976484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.746968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.868254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGT CGCGACACCT CATCGTCACT ACGATGCTTC TCGGTCTCGC AGTCGGCTCC 
GCGAGCGCCG GCGATGCGGA GCGGAAACTG ACTTTCCCGC AAGGCGCGAC CGCCACAAAG
GTGGCCGGCA AGATCTCGGG GCGGAACGGC GTCAATCACC TCGTCGCGGC CGGAGCCGGA
CAAACCATGC AGGTGCTCTT CGCGCCGTCG AATCGATCCT GCTACTTCAA CGTTTTCGAG
CCGGGCGCCG CTGAAGCGGC TCATATCGGA TCAACCGCCG GCAATGAGTT CGGCGTTGAG
CGAACGACAG CGGGCACTTA CCGGGTGCAG GTCTACCTGA TGCGCAATGC GGCGCGACGC
AACGAGGTCT GCCGCTATCA GCTCTCGGTC GAACTCACCG GCGCACCGGG CGGTGTCTCC
GCAGGCGTCT CCGACCGTAT CAAGCAGGAT GTCTGCAAGG CCGAGGCGGC CGGCATGTAT
GGCGTCGACC AGCGACGGAT CGCTGTCGGC CCGGTCCGGA CCTCCCCCCG TGGCTCAGAA
ATCGACGGGA CCGCCGACAA ACAGGCAGAC GGAATCAAGA AGCTGCGCTG CATCTTCAAG
GCGGACGGCA GCTTCGACCA CATCATGGCC ATGACCCCGG ACGGAGAATA A
 
Protein sequence
MLTSRHLIVT TMLLGLAVGS ASAGDAERKL TFPQGATATK VAGKISGRNG VNHLVAAGAG 
QTMQVLFAPS NRSCYFNVFE PGAAEAAHIG STAGNEFGVE RTTAGTYRVQ VYLMRNAARR
NEVCRYQLSV ELTGAPGGVS AGVSDRIKQD VCKAEAAGMY GVDQRRIAVG PVRTSPRGSE
IDGTADKQAD GIKKLRCIFK ADGSFDHIMA MTPDGE