Gene RPD_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2004 
Symbol 
ID4022486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2242198 
End bp2242695 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content66% 
IMG OID637962197 
Productcytochrome C biogenesis protein 
Protein accessionYP_569140 
Protein GI91976481 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.203517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.850592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGC TGCTTGCTAT CGTTTCGATC GTGATCGCGT CGGCCTTCGC CGCGCCACTG 
GCGCATGCGG TGCAGCCCGA CGAGGTGATG GCCGATCCGG CGCAGGAATC CCGGGCGCGG
GAGTTGTCGC GCGAGTTGCG CTGCATGGTC TGTCAGAACC AGTCGATCGA CGATTCCGAT
GCGACGCTCG CCAAGGATCT GCGGCTCCTG GTGCGGGAGC GGATCGCGGC CGGCGACAGC
AACAACCAGG TGCTGGACTA TCTGGTGGCG CGCTACGGCG AATTCGTGCT GCTGAAGCCG
CGGTTCGAGT TGCACACCTT GGTGCTGTGG CTGGTGATGC CACTTGTGCT GATCGGCGGC
GGGCTGGCGC TGTGGCTGAA CGTGCGTCGG CGCGCCCGCA ATGCACCTCG GGCGCTGGAC
ACAGCGCAGC CGCTCACTGC CGATGAGCAG GCAAGGCTGG ACCGGCTGAT GGCTGATCGG
TCGGCAAGGT CCGACTAG
 
Protein sequence
MRKLLAIVSI VIASAFAAPL AHAVQPDEVM ADPAQESRAR ELSRELRCMV CQNQSIDDSD 
ATLAKDLRLL VRERIAAGDS NNQVLDYLVA RYGEFVLLKP RFELHTLVLW LVMPLVLIGG
GLALWLNVRR RARNAPRALD TAQPLTADEQ ARLDRLMADR SARSD