Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2001 |
Symbol | |
ID | 4022483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2238428 |
End bp | 2239585 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637962194 |
Product | cytochrome c-type biogenesis protein cycH |
Protein accession | YP_569137 |
Protein GI | 91976478 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.224163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGC CGCAGTCCCG CGTCGGCGCA TTATCACCCG GAACCCCCAA TCTTATGGCG CTCTGGTTTG TGTTCGCGAT CATGACGGCC ATCGCGGCGT TCGCGGTGTT GTGGCCGCTC GGGCGCGGCG TCCGGACGCT GCGCGAAGGC ACCGAGGCCA ACGTCTACAA GGACCAGCTC GCCGAGGTCG ATCGCGACGC CGAAGCCGGG CTGATCGGCG CCCCCGAAGC ATCCGCCGCA CGCGTCGAGA TCGGACGCCG GCTGCTCGCC AGCGCCGAGG TCGAGCGCCC GGCTTTGTTC ACAACGAGCC GCGGCCTGCG GCGGGGCGTC GCGGTGTTCG CGCTGATCGG CCTGCCGGCG CTGGCGCTGG CGGTGTATCT GCCGCTCGGC TCGCCGATGC AGGGCGACGA TCCGCTGGCG CAGCGCACCA AGACCGCGGC GGCGTCGCAG CCGCTCGAGA ATCTGGTGGC GCAGGTCGAG GCGCATCTCG AGAAGAACCC GACCGACGGC CGCGGCTGGA CCGTGCTGGC GCCGGTGCTC TTTAAGCTCA GCCGCTTCGA GGACGCCGCG CGCGCCTACC GCAATTCGAT CAACTACGCC GGCGAGACAG CGGATCGGCG CGCCGATCTC GGCGAGGTGC TGTCGATGGC GGCGGGCGGC GTGGTCACCG CCGAGGCCAA GTCGGAATTC GAGCGCGCGG TGAAGCTGAA CGCCGACGAC CCGAAGGCGC GCTACTTCCT CGGCCTCGCC GCCGAGCAGG ACGGCCGTCC GAAGGATGCC GCGGCGATCT GGCGGGCGAT GCTGGAGAAG GCGCCGGCCG AAGCGCCGTG GAAGCCGATG CTGCAGGCGC AGCTCGCGCG CCTCGAGGGA ACGCCGTTGC CGGCGTTGCC GGACGACACG ATCGCATCGG CGCAAGGCAT GAGCGAGGGC GACCGCAACG CGATGATCCG CGGCATGGTC GACAAGCTCG CCGCCCGGTT GCAGCAGAAC GGCGACGACG TCGAGGGATG GCTGCGGCTG GTGCGCGCCT ACATGGTGCT CGGCGACGCC GACAAGGCCA GGAGCGCGCA GGCGCAAGCG CGGCAGGCGG TGGCCGGCAA CGCCGAGCGG CTCAAGCAGC TCAATGACGG GCTCAAGAAC CTCGGGCTTG ACGGATGA
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Protein sequence | MNAPQSRVGA LSPGTPNLMA LWFVFAIMTA IAAFAVLWPL GRGVRTLREG TEANVYKDQL AEVDRDAEAG LIGAPEASAA RVEIGRRLLA SAEVERPALF TTSRGLRRGV AVFALIGLPA LALAVYLPLG SPMQGDDPLA QRTKTAAASQ PLENLVAQVE AHLEKNPTDG RGWTVLAPVL FKLSRFEDAA RAYRNSINYA GETADRRADL GEVLSMAAGG VVTAEAKSEF ERAVKLNADD PKARYFLGLA AEQDGRPKDA AAIWRAMLEK APAEAPWKPM LQAQLARLEG TPLPALPDDT IASAQGMSEG DRNAMIRGMV DKLAARLQQN GDDVEGWLRL VRAYMVLGDA DKARSAQAQA RQAVAGNAER LKQLNDGLKN LGLDG
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