| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1992 |
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| Symbol | |
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| ID | 4022474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2226225 |
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| End bp | 2226668 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637962185 |
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| Product | putative phage cell wall peptidase, NlpC/P60 |
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| Protein accession | YP_569128 |
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| Protein GI | 91976469 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | [TIGR02219] putative phage cell wall peptidase, NlpC/P60 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.129722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAGAG TTCTCACCCG CGACGCGCTG GTCGCCGAGG CGCGGGGCTG GATCGGCACG
CGCTATCGGC ATCAGGCCTC GCTCAAGGGC GTCGGCTGCG ATTGCCTGGG GCTGGTACGC
GGCGTCTGGC GCAGCTGCAT CGGCGACGAA CCCGAGGCGC CGCCGCCTTA CGCGCCGGAC
TGGGCGGAAG CGCGCGGACA GGAGGCGCTT GCGGACGCGG CGCTGCGGCA TCTGCGTCCG
ATCGCGCGCG AGGCGTTCGG CGCCGGCGAT GTGCTGCTGT TTCGCTGGAC CGAAAGCTGC
GTCGCCAAGC ACGTCGCGAT CGCGAGTTCG GCGACGACGA TGATCCATGC CCATGACGGC
GCCGCGGTCT GCGAGATCGC GATCGCGCCG TGGTGGCGGC GGCGGCTGGC GTATGCGTTC
AGCTTTCCGG GGATGGTGGA GTGA
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| Protein sequence | MDRVLTRDAL VAEARGWIGT RYRHQASLKG VGCDCLGLVR GVWRSCIGDE PEAPPPYAPD
WAEARGQEAL ADAALRHLRP IAREAFGAGD VLLFRWTESC VAKHVAIASS ATTMIHAHDG
AAVCEIAIAP WWRRRLAYAF SFPGMVE
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