Gene RPD_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1991 
Symbol 
ID4022473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2225261 
End bp2226184 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content70% 
IMG OID637962184 
Productbacteriophage protein 
Protein accessionYP_569127 
Protein GI91976468 
COG category[S] Function unknown 
COG ID[COG5449] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02218] phage conserved hypothetical protein BR0599 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0367109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.439972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGA TTCCATTCGC CCTGCAGGCC CGACTCGACT CAGGCGCTAC CACGCTGGCG 
CAGGGTTGGA TCGTACGGCG GCGCGACGGC GCGGTGCTGG GCTTCACCGA TCACGATCGT
GATCTGATCG TCGACGGCGT GGTCTGCCGG GCGGGCACCG GTTTCGCCGC ATCGGAAGCG
TCGCAGCGGT TCGATTTGTC GGTCGACGGC GCGGAGATTT CCGGCGCGCT GTCCGACGAT
CTGTTGAGTG AGGCCGATCT CGCCGCGGGA CGCTACGACG CCGCGACGAT CGAGACCTGG
CTGGTCGACT GGAGCGATCC GATGTTGCGC GTGCTGATCG CGCGCGGCGC GCTCGGCGAG
GTGCGGCGCG ACGGACAGGC GTTCACCGCG GAACTCCGCG GGCTTGCCGA TCTGTTGTCG
CAGGAAAGCG GCCGTCTCTA CACCGCGAGT TGCGGCGCCG ATCTCGGCGA CGGCCGCTGC
CGCGTCGATC TCGCCAGCGC GGCGTGGCGC GGCGCAGGCA GCGTCGCGGC CGCGTTCGGA
ACGTCGACCG TCGCGGTGTC CGGACTGGAA GGCTACGCGG CGGGATTGTT CACCGCCGGA
CGATTGAGCT GGATCAGCGG CGCCAATGCC GGCTGCGCGA TCGAGATCAA GCAGCATCGC
ATCGTGGCCG GCGAAGTGCG GCTGTCGCTG TGGCAGGCGA TGGCCGAGCC GATCGCGGCC
GGCGATGGCT TCGTGGTCAC GGCCGGCTGC GACAAGCAGT TTTCGACCTG CCGCGATTGC
TTCGGCAACG CCGTCAATTT TCGCGGCTTC CCGCAGATCC CCGGCAATGA TTTCGTCGTG
AGCTATCCGG TGCCCGGCAC GCCCGGACAC GGCGGCGGTT CGATCGGTGG CGGCGGCGGC
GGGGTCGTCG GCGGGGGCGG CTAA
 
Protein sequence
MRAIPFALQA RLDSGATTLA QGWIVRRRDG AVLGFTDHDR DLIVDGVVCR AGTGFAASEA 
SQRFDLSVDG AEISGALSDD LLSEADLAAG RYDAATIETW LVDWSDPMLR VLIARGALGE
VRRDGQAFTA ELRGLADLLS QESGRLYTAS CGADLGDGRC RVDLASAAWR GAGSVAAAFG
TSTVAVSGLE GYAAGLFTAG RLSWISGANA GCAIEIKQHR IVAGEVRLSL WQAMAEPIAA
GDGFVVTAGC DKQFSTCRDC FGNAVNFRGF PQIPGNDFVV SYPVPGTPGH GGGSIGGGGG
GVVGGGG