| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1987 |
|---|
| Symbol | |
|---|
| ID | 4022469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2221564 |
|---|
| End bp | 2222199 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637962180 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_569123 |
|---|
| Protein GI | 91976464 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5448] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02217] conserved hypothetical protein TIGR02217 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.736956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.542758 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAT TTCATGAAGT CCTGTTTCCG CTCGATGTCG CGCTGAAAAG CGCGGGCGGG
CCGGAGCGGC GGACCGAAAT CGTGTCGTTC GGCTCCGGCC GCGAGCAGCG CAACGCGCGC
TGGGCGGAGT CGCGCCGACG CTACGATGCG GGCTACGGCG TCAAGACGCT GGAGGCGTTG
CAGGCGGTGG TGGCGTTCTT CGAGGAGCGA CGCGGCCAGC TCTACGGCTT CCGCTGGCGC
GACCGGCTCG ACAGTTCGTC GGCGGCGCCT GGGCATCCGA CGTCGCCGCT CGATCAGGGC
ATCGGCATCG GCGACGGCGT CACCGCGAAC TACCAATTGG TGAAGAGCTA CGGCGCAGGT
TTCGCGCCCT ACGCGCGGCG GATCACGAAG CCGGTCGCAG GCTCGGTGCG CGTCGCGGTC
GGCGGTGTCG AGGCAGCGGG CGGCTTCACC GTCGATGCGA CACGCGGGGT GGTGACGTTC
GCCGCCGGCC GCATTCCGCC GCCCGGCGCG GCGGTGACGG CGGGTTATCA GTTCGACGTG
CCGGTGCGGT TCGACACCGA CTATCTCGAA GTCGATCTGT CGGCATTCGC GGCCGGCGCG
ATCCCGAACA TCCCGGTGAT CGAGATCAGG GTGTGA
|
|---|
| Protein sequence | MTAFHEVLFP LDVALKSAGG PERRTEIVSF GSGREQRNAR WAESRRRYDA GYGVKTLEAL
QAVVAFFEER RGQLYGFRWR DRLDSSSAAP GHPTSPLDQG IGIGDGVTAN YQLVKSYGAG
FAPYARRITK PVAGSVRVAV GGVEAAGGFT VDATRGVVTF AAGRIPPPGA AVTAGYQFDV
PVRFDTDYLE VDLSAFAAGA IPNIPVIEIR V
|
|---|
| |