Gene RPD_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1982 
Symbol 
ID4022464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2219557 
End bp2219967 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content71% 
IMG OID637962175 
Productgene transfer agent (GTA) orfg8 
Protein accessionYP_569118 
Protein GI91976459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.504072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACTG CGACCACCGC GCTGCGCGCG GCCATTCATC GCGCGCTGAC CACCGATGGC 
GGGCTGATCG CCGCGCTCGG CGGGGCGCGG GTCTATGACG AGCCGCCGCG CGATGCGGCG
TTTCCCTACG TCACGCTCGG CGAGGCGCGG ATCAGCGACG TCTCCGCCGA CGACGGGTCG
ACCCAGGAGC ATCAGCTCAC GCTGCACGCC TGGTCGCGGC AGGGCGGGCA CAGAGAAGCG
CATGTCATCA CCGGTGCGCT GCTGCAGGCG CTCGATGACG CGCCGCTGTC GCCGGCCGGC
CATCGCCTGG TGAATCTGCG TTTTGCGATC GCCGACATCC GCCGCGAGGT CGACGGCCGC
ACCTATCACG CATCGGTGCG GTTCCGCGCC GTGACCGAAC CCGCGAACTG A
 
Protein sequence
MPTATTALRA AIHRALTTDG GLIAALGGAR VYDEPPRDAA FPYVTLGEAR ISDVSADDGS 
TQEHQLTLHA WSRQGGHREA HVITGALLQA LDDAPLSPAG HRLVNLRFAI ADIRREVDGR
TYHASVRFRA VTEPAN