Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1951 |
Symbol | |
ID | 4022433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2189156 |
End bp | 2189719 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962144 |
Product | hypothetical protein |
Protein accession | YP_569087 |
Protein GI | 91976428 |
COG category | [S] Function unknown |
COG ID | [COG5436] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.153158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGC TCCTGACCAC CATCATCGCA GGCATCGTGC TCGGCGGTAT CGTGCATCTC GTCAGCGTGC TGGCGCTGCC GCGTATCGCG AGCCAGGACG CCTATGCGCG GCTCACGCCA CTGACCAAGG TCAACGAGGT TTCGCAACTC CCGCAGGCGT CGCCGGACAA CGCGCCGCTG CCGTTCCTCG ATCCGGCCTT CGCCGTCGCA GTGTGCCGCT ACGATCTGTC GAACGGTCCC TTGAAACTCA CTGTTCCGAT CAGCCAGGCC TACACCGCGG TGTCGTTCTA CACCCGCAGC GAGGTCGCCT ATTACGCGAT CAACGACCGC TCCGCCGGCC GCAAGATCAT CGAACTCGAC CTGATGACTA CGGAGCAACA CGGCAATCTG CCGGAAGACG AAGACGTCAC CGCCGCCGAC CGGCTGATCA TCGACTCGCC GAGCACCACG GGTCTGATCG TAATGAAAGC GCTGGCCTCG GAGCCCGGCC TGATGCCGCA GGCGCGCGCG GCGCTGAGTG CGGCGAGCTG CAAGGTGCAG CCCGAGCCGC AGGCGAAGTC GTGA
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Protein sequence | MIRLLTTIIA GIVLGGIVHL VSVLALPRIA SQDAYARLTP LTKVNEVSQL PQASPDNAPL PFLDPAFAVA VCRYDLSNGP LKLTVPISQA YTAVSFYTRS EVAYYAINDR SAGRKIIELD LMTTEQHGNL PEDEDVTAAD RLIIDSPSTT GLIVMKALAS EPGLMPQARA ALSAASCKVQ PEPQAKS
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