Gene RPD_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1951 
Symbol 
ID4022433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2189156 
End bp2189719 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content65% 
IMG OID637962144 
Producthypothetical protein 
Protein accessionYP_569087 
Protein GI91976428 
COG category[S] Function unknown 
COG ID[COG5436] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.153158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGC TCCTGACCAC CATCATCGCA GGCATCGTGC TCGGCGGTAT CGTGCATCTC 
GTCAGCGTGC TGGCGCTGCC GCGTATCGCG AGCCAGGACG CCTATGCGCG GCTCACGCCA
CTGACCAAGG TCAACGAGGT TTCGCAACTC CCGCAGGCGT CGCCGGACAA CGCGCCGCTG
CCGTTCCTCG ATCCGGCCTT CGCCGTCGCA GTGTGCCGCT ACGATCTGTC GAACGGTCCC
TTGAAACTCA CTGTTCCGAT CAGCCAGGCC TACACCGCGG TGTCGTTCTA CACCCGCAGC
GAGGTCGCCT ATTACGCGAT CAACGACCGC TCCGCCGGCC GCAAGATCAT CGAACTCGAC
CTGATGACTA CGGAGCAACA CGGCAATCTG CCGGAAGACG AAGACGTCAC CGCCGCCGAC
CGGCTGATCA TCGACTCGCC GAGCACCACG GGTCTGATCG TAATGAAAGC GCTGGCCTCG
GAGCCCGGCC TGATGCCGCA GGCGCGCGCG GCGCTGAGTG CGGCGAGCTG CAAGGTGCAG
CCCGAGCCGC AGGCGAAGTC GTGA
 
Protein sequence
MIRLLTTIIA GIVLGGIVHL VSVLALPRIA SQDAYARLTP LTKVNEVSQL PQASPDNAPL 
PFLDPAFAVA VCRYDLSNGP LKLTVPISQA YTAVSFYTRS EVAYYAINDR SAGRKIIELD
LMTTEQHGNL PEDEDVTAAD RLIIDSPSTT GLIVMKALAS EPGLMPQARA ALSAASCKVQ
PEPQAKS