Gene RPD_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1950 
Symbol 
ID4022432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2188366 
End bp2189142 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content68% 
IMG OID637962143 
Producthypothetical protein 
Protein accessionYP_569086 
Protein GI91976427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.155338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACGA TCAGCAAACC GGCTTTGGTC CGGGATGATC GCGTCCGGCT TCCAGTCCTG 
TTGTTCGCGC TGCTCGGCGT GACCCTCGGC GGCTGCGCCG GAGGTGATTT CGGTCGAACC
CGGGGGGATT TCGTCACCGA CGACATGCAT CGCTGGGTCG GCATCGAGGC GACCGGAAGC
GTTGGCGCAC GACCGTCCGA CTTCCAGCTC ACCGACGAAG AGCGCACGCT GCGCGACATG
GCCTATCCGC TGATCGAGCC GCCACGGCAG CGGCCGGCGT GGAAGACCGT GTTCGGCGAC
TATCAGCCGA TCGCAGCACC CTGGCGGCAG GCACCGCCGT TTGATCGCAC CGCCTACGGC
AAGATGCTGG TCGACGAGCC GCATCGCTCG CACACCTCGC GCTACGCCGC GCTAAGCGAA
GACATCCGCA ACGACCTGAC GCGATTCGAG CCGTTCAAAT TCACCGCGAT GCGGGTGATC
GAACTCGACC GCAAGCGCAA CGCGGCGCTG AAATACATCT CCGACCTGTC GCCGCGCGAG
CGCGCCGATG CGATCGGCCG GATGGAGGAG AACGCGCTGA TCGTGCAGTG GGTGCAGCAG
TGCCTCCACC GCCGGGTCGC GTCCTATCGC TGGGGGCTGG AGCGGCTGGT GATCATGGCC
CCGGACACGC TCGCCGCCGA TGCCGACCGC CTGATCGTCG AGCTCGAGGC GCAGGCGTCG
AACCTGTCGG TCCCGGCGGG GCCGGCGAGG GGGCATGTGC TCAAAGTCGG CGGCTGA
 
Protein sequence
MRTISKPALV RDDRVRLPVL LFALLGVTLG GCAGGDFGRT RGDFVTDDMH RWVGIEATGS 
VGARPSDFQL TDEERTLRDM AYPLIEPPRQ RPAWKTVFGD YQPIAAPWRQ APPFDRTAYG
KMLVDEPHRS HTSRYAALSE DIRNDLTRFE PFKFTAMRVI ELDRKRNAAL KYISDLSPRE
RADAIGRMEE NALIVQWVQQ CLHRRVASYR WGLERLVIMA PDTLAADADR LIVELEAQAS
NLSVPAGPAR GHVLKVGG