| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1944 |
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| Symbol | |
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| ID | 4022426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2181926 |
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| End bp | 2183749 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962137 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_569080 |
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| Protein GI | 91976421 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.133284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0645132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGTAT CCAACATCAT CAGCGAGTGC CTCGACGCAT TGCTGCATCC GTCGGCGCGA
TACGACGCGC TGGCGAGCGC GCGTCATCGC GCGTTCATTG CGCCTCGCCT GCTCGGCAGC
CTCGTCGCCT TCGCTGCGTT CCCGATCTAC CTCGTGCTCC GGGGCGCGCC GAGTGCGCTC
GAAGCGCTGG CGTTCGCATG GCTGATCGCG CCGATTCTGC TGTCGTGGTT TCTGTCACGC
ACCGGCCGTT ATCGTAGTGC CCATGTGCTG TCCTCGCTGT CGCTGGCGAG CCTGATCGTG
ATCGTCGCGG CGCAGACCGG CGGAATTTCA TCTTTCGCCG CGATCTGGCT GGTGCTGGTG
CCGCTCGAGG CCGCGCTGTC GGCGTCGCGC CGTGTCGTGA GCTTCGCCGC GGCGCTCGCG
CTGGGTTGCG CCGCGGCGCT GATCGCGACC GGTCAGTTCG GCTGGCTTCC GACGCCCACC
GGCGCCGACG TGTCGCACGG CACGCTGATG GCGTTCAGTG TCGCATCCGC GACGCTGTAC
GCGGCCGGAC TCGCGTTCGG CGCGGAATCG CTGGCGCGCA CCAGCGACAC GCTGCTCAGC
GTCGAGGAGG AGCGCTACCG GCTGCTCGCC CTTCACATGA GCGATGTGAT CTCGCGCCAC
AGCCGCAACG GCGCGGTGCA GTTCATTTCA CCGGCCGTCG AAACCCTGCT CGGTCTGCCT
GCGGCTCGGC TCGCGGGGCA CGGCCTGTTC GATCGGGTCC ACGTCGCCGA TCGGCCAGCC
TATCTCAAGG CGCTGTCGGA CGCAGGCCTT GGCGGCGAGG GACGCAGCGT CGAGTTCCGC
GTTCGCCGCG AGGTTGCGCG CGATGATCGC GGCCGGCCGA CGGCACCGGA ATTCATCTGG
CTTGAAATGC GCTGCCGCCC GTTTGCACCC GGCACTCAAT CGTCGGCCGC CGGCGAGACC
GGCGTGGTCG CGGTGATGCG CGACGTCACC GATCGCAAGC TGCAGGAACA GGCCCTGGAA
CAGGCGCGCG CCGAGGCGAG CCGCGCCGAC GCCAGCAAGA GCCGCTTCCT TGCCACCATG
AGCCACGAGC TGCGCACGCC GCTGAATGCG ATCATCGGCT TCTCCGACAT GATCCTGCAC
GAAGACGAGC TGATGCTCGC GCCGGAGCGG CGCAAGGAAT ATGCGCAGCT CATCAACGAT
TCCGGTCAGC ACCTGTTGTC GGTCGTCAAC GGCATTCTCG ACATGTCGAA GATGGAATCG
GGAAATTTCG AGATCGTTCC GGAGCCGTTC GCGCCGCGAC CGGCGCTGCT GAATTGCTGC
AATCTGCTGG CGCTGAAGGC CCGCGAGAAT GGCATCGAGC TGGTGACGCG CGCGCCTGAA
GATCTTCCGG AGATAGTCGG CGATGCGCGC GCGTTCAAGC AGATCCTGCT CAATCTGGTG
TCGAACGCGA TCAAGTTCAC AGAGCGCGGC GGCACCGTCT CCGTCGAAGC CGCCGTTGAA
GCGGCGCGGC TGGTGCTGCG GGTCCGCGAC AACGGCGTCG GCATTGCGGC GGAAGACCTG
AAACGGATCG GCGATCCGTT CTTCCAGGCC GGAAAGACGT ATCAGCGCCG CCATGAGGGC
ACCGGGCTCG GCCTTTCGAT CGTGAAGAGC CTGGTCGGTC TTCACGGCGG CAAGATCGAC
GTGACGAGCG AGGTTGATCG GGGCACGATC GTGACGATAT CGCTGCCGTT GGCGCCTTCG
GCGCCGTGCA ACGTCACGAC GCTGCAGCCG CCACAGCCGG CCGAGCCTCA ATTGCAAGAC
TATCAGGTGA AGAAGAGTGC CTAA
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| Protein sequence | MAVSNIISEC LDALLHPSAR YDALASARHR AFIAPRLLGS LVAFAAFPIY LVLRGAPSAL
EALAFAWLIA PILLSWFLSR TGRYRSAHVL SSLSLASLIV IVAAQTGGIS SFAAIWLVLV
PLEAALSASR RVVSFAAALA LGCAAALIAT GQFGWLPTPT GADVSHGTLM AFSVASATLY
AAGLAFGAES LARTSDTLLS VEEERYRLLA LHMSDVISRH SRNGAVQFIS PAVETLLGLP
AARLAGHGLF DRVHVADRPA YLKALSDAGL GGEGRSVEFR VRREVARDDR GRPTAPEFIW
LEMRCRPFAP GTQSSAAGET GVVAVMRDVT DRKLQEQALE QARAEASRAD ASKSRFLATM
SHELRTPLNA IIGFSDMILH EDELMLAPER RKEYAQLIND SGQHLLSVVN GILDMSKMES
GNFEIVPEPF APRPALLNCC NLLALKAREN GIELVTRAPE DLPEIVGDAR AFKQILLNLV
SNAIKFTERG GTVSVEAAVE AARLVLRVRD NGVGIAAEDL KRIGDPFFQA GKTYQRRHEG
TGLGLSIVKS LVGLHGGKID VTSEVDRGTI VTISLPLAPS APCNVTTLQP PQPAEPQLQD
YQVKKSA
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