Gene RPD_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1942 
Symbol 
ID4022424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2180580 
End bp2181011 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID637962135 
ProductFe-S metabolism associated SufE 
Protein accessionYP_569078 
Protein GI91976419 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0211559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.278491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA TCGACGAAAT CAGGGACAAT TTCGCACTGC TGGACGATTG GGACGATCGC 
TATCGTTACG TGATCGAGCT CGGCCGCACG CTCGATCCGA TGCCCGAGGA GCAGCACTCG
TCCGCCAACA AGGTCAATGG TTGCGCCAGC CAGGTCTGGC TGTCGCGCAA GCTGACGCGG
AGCGCCGACG ATGAGCCGGT GCTGAACTAT CTCGGCGACA GTGACGCGCA CATCGTCCGC
GGCCTGATCG CGATCCTGCT GTCGATGGTG TCCGGCCGCA CGCCGACAGA GATCCTTGCA
GCGGAGCCGA TCAAGGTGTT CGACGAACTC GGCTTTCGGG AACATCTCAC GCCGCAGCGC
TCCAACGGCC TGCGCTCGAT GATCGAACGG ATCAAGCTCG ACGCGCACGA AACACTCGCC
GCGTCGAGCT GA
 
Protein sequence
MMTIDEIRDN FALLDDWDDR YRYVIELGRT LDPMPEEQHS SANKVNGCAS QVWLSRKLTR 
SADDEPVLNY LGDSDAHIVR GLIAILLSMV SGRTPTEILA AEPIKVFDEL GFREHLTPQR
SNGLRSMIER IKLDAHETLA ASS