Gene RPD_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1941 
Symbol 
ID4022423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2179955 
End bp2180557 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content69% 
IMG OID637962134 
Producthypothetical protein 
Protein accessionYP_569077 
Protein GI91976418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0327741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.29252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGC GCGAGCGCAA TGCGACCGCT CGCGCGGCCG GCAAGGCCGA GATCGACTCG 
TTCCGCGCCC AGCATTTGAC GTTGGCGGAG CGGCAGATCA TGACCGCGGA AGGCATCGCC
AGCGTCACGA TCGACGACGG GGAAAGCCCG CTGGCGTGGC TCGCACGCCG CAAGGGCCGC
GATGGACGCA GCCTGATCAG CAGCCACCAG TTCGTCGCCG GCGAGCGATT GCGCGCGGAC
TTCACGCGCG GAAACCTGTC GCCGCGGGTG ACCTCGAACT GGGGCGCGCC GACCGGCCGG
GCAGGCAGCC GCGGGGCCGG CGAGATGACC GATCTGGTCG TGGCCTCGCG TCAGCGCGTG
CAGCACGCGA TCACCGCATG CGGGCCGGAA TTCTCCGGCA TCCTACTGGA TGTTTGCTGC
TTCCTGCACG GGCTCGAGGA CGTCGAGCGC GAGCGTGGCT GGCCGTCGCG TTCGGCCAAG
GTCGTGCTGC AACTGGCGCT CGACCGCCTG GCGCGGCACT ACGGCCTTGC GCCGCGGTCC
AGCGACGCGA AACCGAAAAT GCGGAGTTGG CTCGCCGAGG ATGCCGAATT CGTGGTGACC
TGA
 
Protein sequence
MKRRERNATA RAAGKAEIDS FRAQHLTLAE RQIMTAEGIA SVTIDDGESP LAWLARRKGR 
DGRSLISSHQ FVAGERLRAD FTRGNLSPRV TSNWGAPTGR AGSRGAGEMT DLVVASRQRV
QHAITACGPE FSGILLDVCC FLHGLEDVER ERGWPSRSAK VVLQLALDRL ARHYGLAPRS
SDAKPKMRSW LAEDAEFVVT